RNA–Protein interactions for RNA: ENST00000556885.5

ETFRF1-209, Transcript of electron transfer flavoprotein regulatory factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ETFRF1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFRF1-209ENST00000556885 AEBP2Q6ZN18 517 aaPredicted RBP35.1■■■■□ 3.21
ETFRF1-209ENST00000556885 CHIC1Q5VXU3 224 aa34.16■■■■□ 3.06
ETFRF1-209ENST00000556885 PHF23Q9BUL5 403 aaPredicted RBP30.01■■■□□ 2.39
ETFRF1-209ENST00000556885 SENP3Q9H4L4 574 aaPredicted RBP29.86■■■□□ 2.37
ETFRF1-209ENST00000556885 FOXD1Q16676 465 aa27.7■■■□□ 2.02
ETFRF1-209ENST00000556885 PLPPR3Q6T4P5 718 aa27.7■■■□□ 2.02
ETFRF1-209ENST00000556885 PPP6R1Q9UPN7 881 aa26.53■■□□□ 1.84
ETFRF1-209ENST00000556885 ADRA2BP18089 450 aa26.51■■□□□ 1.83
ETFRF1-209ENST00000556885 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.78
ETFRF1-209ENST00000556885 PIAS4Q8N2W9 510 aaPredicted RBP26.12■■□□□ 1.77
ETFRF1-209ENST00000556885 MSH5O43196 834 aa25.64■■□□□ 1.7
ETFRF1-209ENST00000556885 PPP4R3CPQ6ZMV5 832 aa24.38■■□□□ 1.49
ETFRF1-209ENST00000556885 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
ETFRF1-209ENST00000556885 MAPK8IP2Q13387 824 aaPredicted RBP24.09■■□□□ 1.45
ETFRF1-209ENST00000556885 DMRT2Q9Y5R5 561 aa23.8■■□□□ 1.4
ETFRF1-209ENST00000556885 CNKSR2Q8WXI2 1034 aa23.74■■□□□ 1.39
ETFRF1-209ENST00000556885 NCBP3Q53F19 620 aaKnown RBP23.72■■□□□ 1.39
ETFRF1-209ENST00000556885 ABCC9O60706 1549 aa23.67■■□□□ 1.38
ETFRF1-209ENST00000556885 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
ETFRF1-209ENST00000556885 KCNA4P22459 653 aa23.63■■□□□ 1.37
ETFRF1-209ENST00000556885 POTEDQ86YR6 584 aa23.59■■□□□ 1.37
ETFRF1-209ENST00000556885 NPM3O75607 178 aaKnown RBP23.34■■□□□ 1.33
ETFRF1-209ENST00000556885 RNF216Q9NWF9 866 aaPredicted RBP23.3■■□□□ 1.32
ETFRF1-209ENST00000556885 HOXD11P31277 338 aaPredicted RBP23.23■■□□□ 1.31
ETFRF1-209ENST00000556885 DCAF8L1A6NGE4 600 aa22.82■■□□□ 1.24
ETFRF1-209ENST00000556885 DNAJC5BQ9UF47 199 aa22.66■■□□□ 1.22
ETFRF1-209ENST00000556885 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
ETFRF1-209ENST00000556885 SLC4A1APQ9BWU0 796 aaKnown RBP22.49■■□□□ 1.19
ETFRF1-209ENST00000556885 NACADO15069 1562 aa22.4■■□□□ 1.18
ETFRF1-209ENST00000556885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.18■■□□□ 1.14
ETFRF1-209ENST00000556885 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
ETFRF1-209ENST00000556885 SLC4A2P04920 1241 aa22.06■■□□□ 1.12
ETFRF1-209ENST00000556885 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
ETFRF1-209ENST00000556885 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
ETFRF1-209ENST00000556885 RNF39Q9H2S5 420 aa21.93■■□□□ 1.1
ETFRF1-209ENST00000556885 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.1
ETFRF1-209ENST00000556885 BICRAQ9NZM4 1560 aa21.86■■□□□ 1.09
ETFRF1-209ENST00000556885 FOXD4L1Q9NU39 408 aa21.8■■□□□ 1.08
ETFRF1-209ENST00000556885 U3KPZ7 1027 aaPredicted RBP21.77■■□□□ 1.08
ETFRF1-209ENST00000556885 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.07
ETFRF1-209ENST00000556885 ZBTB22O15209 634 aa21.72■■□□□ 1.07
ETFRF1-209ENST00000556885 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.06
ETFRF1-209ENST00000556885 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
ETFRF1-209ENST00000556885 C1QBPQ07021 282 aaKnown RBP21.68■■□□□ 1.06
ETFRF1-209ENST00000556885 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.06
ETFRF1-209ENST00000556885 MYCNP04198 464 aaPredicted RBP21.59■■□□□ 1.05
ETFRF1-209ENST00000556885 CACNB1Q02641 598 aaPredicted RBP21.5■■□□□ 1.03
ETFRF1-209ENST00000556885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.48■■□□□ 1.03
ETFRF1-209ENST00000556885 HNRNPUL2Q1KMD3 747 aaKnown RBP21.48■■□□□ 1.03
ETFRF1-209ENST00000556885 CSRNP3Q8WYN3 585 aa21.48■■□□□ 1.03
ETFRF1-209ENST00000556885 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
ETFRF1-209ENST00000556885 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
ETFRF1-209ENST00000556885 SAMD1Q6SPF0 538 aaPredicted RBP21.39■■□□□ 1.01
ETFRF1-209ENST00000556885 SCRIBQ14160 1630 aa21.38■■□□□ 1.01
ETFRF1-209ENST00000556885 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
ETFRF1-209ENST00000556885 APLP2Q06481 763 aa21.31■■□□□ 1
ETFRF1-209ENST00000556885 SPINK5Q9NQ38 1064 aaPredicted RBP21.21■□□□□ 0.99
ETFRF1-209ENST00000556885 CAPN15O75808 1086 aa21.17■□□□□ 0.98
ETFRF1-209ENST00000556885 ATXN8OSP0DMR3 200 aa21.06■□□□□ 0.96
ETFRF1-209ENST00000556885 TRHP20396 242 aaPredicted RBP21.03■□□□□ 0.96
ETFRF1-209ENST00000556885 ZNF219Q9P2Y4 722 aaPredicted RBP21.02■□□□□ 0.96
ETFRF1-209ENST00000556885 ATF5Q9Y2D1 282 aaPredicted RBP21■□□□□ 0.95
ETFRF1-209ENST00000556885 DSG3P32926 999 aa20.82■□□□□ 0.92
ETFRF1-209ENST00000556885 DNAJC5Q9H3Z4 198 aa20.77■□□□□ 0.92
ETFRF1-209ENST00000556885 ABCB7O75027 752 aa20.74■□□□□ 0.91
ETFRF1-209ENST00000556885 CUX2O14529 1486 aa20.65■□□□□ 0.9
ETFRF1-209ENST00000556885 POLA2Q14181 598 aa20.65■□□□□ 0.9
ETFRF1-209ENST00000556885 NCAPD3P42695 1498 aa20.64■□□□□ 0.89
ETFRF1-209ENST00000556885 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
ETFRF1-209ENST00000556885 HMGXB3Q12766 1538 aa20.52■□□□□ 0.87
ETFRF1-209ENST00000556885 SMARCA2P51531 1590 aa20.51■□□□□ 0.87
ETFRF1-209ENST00000556885 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
ETFRF1-209ENST00000556885 SMARCA4P51532 1647 aa20.45■□□□□ 0.86
ETFRF1-209ENST00000556885 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
ETFRF1-209ENST00000556885 PEG3Q9GZU2 1588 aa20.33■□□□□ 0.84
ETFRF1-209ENST00000556885 ZBTB12Q9Y330 459 aaPredicted RBP20.31■□□□□ 0.84
ETFRF1-209ENST00000556885 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
ETFRF1-209ENST00000556885 NESP48681 1621 aa20.24■□□□□ 0.83
ETFRF1-209ENST00000556885 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
ETFRF1-209ENST00000556885 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
ETFRF1-209ENST00000556885 FBLN2P98095 1184 aa20.17■□□□□ 0.82
ETFRF1-209ENST00000556885 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
ETFRF1-209ENST00000556885 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.8
ETFRF1-209ENST00000556885 MKRN4PQ13434 485 aaPredicted RBP20.07■□□□□ 0.8
ETFRF1-209ENST00000556885 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
ETFRF1-209ENST00000556885 CADPSQ9ULU8 1353 aa19.97■□□□□ 0.79
ETFRF1-209ENST00000556885 OSCARQ8IYS5 282 aa19.95■□□□□ 0.78
ETFRF1-209ENST00000556885 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
ETFRF1-209ENST00000556885 WDR62O43379 1518 aa19.92■□□□□ 0.78
ETFRF1-209ENST00000556885 RBM42Q9BTD8 480 aaKnown RBP19.88■□□□□ 0.77
ETFRF1-209ENST00000556885 WIZO95785 1651 aa19.81■□□□□ 0.76
ETFRF1-209ENST00000556885 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
ETFRF1-209ENST00000556885 SPDYE2BA6NHP3 402 aa19.73■□□□□ 0.75
ETFRF1-209ENST00000556885 SPDYE6P0CI01 402 aa19.73■□□□□ 0.75
ETFRF1-209ENST00000556885 SPDYE2Q495Y8 402 aa19.73■□□□□ 0.75
ETFRF1-209ENST00000556885 CFTRP13569 1480 aa19.73■□□□□ 0.75
ETFRF1-209ENST00000556885 FANCD2Q9BXW9 1451 aa19.73■□□□□ 0.75
ETFRF1-209ENST00000556885 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
ETFRF1-209ENST00000556885 ZNF692Q9BU19 519 aaPredicted RBP19.65■□□□□ 0.74
ETFRF1-209ENST00000556885 TOP2AP11388 1531 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms