Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI1Q7Z5J4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 ARMC10P1-201ENST00000313754 855 ntBASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RAI1Q7Z5J4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAI1Q7Z5J4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RAI1Q7Z5J4 AL691432.2-201ENST00000607222 2038 ntBASIC16.71■□□□□ 0.26
RAI1Q7Z5J4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 AK4P3-201ENST00000418260 669 ntBASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 AL137013.1-201ENST00000432946 1228 ntBASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 HLA-A-209ENST00000638375 975 ntBASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 AC112907.3-201ENST00000577781 2400 ntBASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 INGX-201ENST00000359239 846 ntBASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 HMGA1P5-201ENST00000412453 271 ntBASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 LIN28AP1-201ENST00000429574 405 ntBASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 AC131212.4-201ENST00000623606 975 ntBASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 TCF3P1-201ENST00000423021 1937 ntBASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI1Q7Z5J4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 AC063952.2-201ENST00000498792 1227 ntBASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms