Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 AC011767.1-201ENST00000617410 1153 ntBASIC18.76■□□□□ 0.59
PDCD4Q53EL6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 LTB4R2-202ENST00000528054 3092 ntBASIC18.76■□□□□ 0.59
PDCD4Q53EL6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PDCD4Q53EL6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 AC010980.2-201ENST00000587099 1412 ntBASIC18.75■□□□□ 0.59
PDCD4Q53EL6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 AL138781.2-201ENST00000617896 1843 ntBASIC18.75■□□□□ 0.59
PDCD4Q53EL6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 KRT18P5-201ENST00000436075 1291 ntBASIC18.75■□□□□ 0.59
PDCD4Q53EL6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 AC087623.3-201ENST00000607047 1098 ntBASIC18.75■□□□□ 0.59
PDCD4Q53EL6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 OR10C1-204ENST00000622521 1039 ntBASIC18.75■□□□□ 0.59
PDCD4Q53EL6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 AC018553.1-201ENST00000616682 1458 ntBASIC18.75■□□□□ 0.59
PDCD4Q53EL6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDCD4Q53EL6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 AC116351.2-201ENST00000606540 1585 ntBASIC18.74■□□□□ 0.59
PDCD4Q53EL6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 AC006015.1-201ENST00000429970 570 ntBASIC18.74■□□□□ 0.59
PDCD4Q53EL6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 AC231657.2-201ENST00000624556 255 ntBASIC18.74■□□□□ 0.59
PDCD4Q53EL6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.74■□□□□ 0.59
PDCD4Q53EL6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.73■□□□□ 0.59
PDCD4Q53EL6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 KRT17P1-201ENST00000399211 1546 ntBASIC18.73■□□□□ 0.59
PDCD4Q53EL6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms