Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC01554Q52M75 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01554Q52M75 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 AC024909.3-201ENST00000611513 2257 ntBASIC9.8□□□□□ -0.84
LINC01554Q52M75 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 BX664725.1-201ENST00000438252 379 ntBASIC9.8□□□□□ -0.84
LINC01554Q52M75 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 AL031848.2-201ENST00000607670 837 ntBASIC9.8□□□□□ -0.84
LINC01554Q52M75 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC9.8□□□□□ -0.84
LINC01554Q52M75 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 PID1-202ENST00000392054 2745 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01554Q52M75 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC01554Q52M75 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC01554Q52M75 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
LINC01554Q52M75 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LINC01554Q52M75 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
LINC01554Q52M75 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC01554Q52M75 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
LINC01554Q52M75 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC01554Q52M75 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
LINC01554Q52M75 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC9.79□□□□□ -0.84
LINC01554Q52M75 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC01554Q52M75 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01554Q52M75 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC9.79□□□□□ -0.84
LINC01554Q52M75 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms