Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC008040.2-201ENST00000461049 708 ntBASIC18.6■□□□□ 0.57
GABREP78334 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.6■□□□□ 0.57
GABREP78334 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.6■□□□□ 0.57
GABREP78334 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
GABREP78334 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.6■□□□□ 0.57
GABREP78334 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.6■□□□□ 0.57
GABREP78334 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
GABREP78334 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.6■□□□□ 0.57
GABREP78334 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GABREP78334 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.6■□□□□ 0.57
GABREP78334 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.59■□□□□ 0.57
GABREP78334 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.59■□□□□ 0.57
GABREP78334 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABREP78334 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GABREP78334 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABREP78334 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABREP78334 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.59■□□□□ 0.57
GABREP78334 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.59■□□□□ 0.57
GABREP78334 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABREP78334 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
GABREP78334 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABREP78334 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.59■□□□□ 0.57
GABREP78334 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
GABREP78334 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.59■□□□□ 0.57
GABREP78334 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.59■□□□□ 0.57
GABREP78334 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.59■□□□□ 0.57
GABREP78334 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.59■□□□□ 0.57
GABREP78334 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.59■□□□□ 0.57
GABREP78334 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.59■□□□□ 0.57
GABREP78334 AC010653.2-201ENST00000623505 997 ntBASIC18.59■□□□□ 0.57
GABREP78334 HLA-A-209ENST00000638375 975 ntBASIC18.59■□□□□ 0.57
GABREP78334 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABREP78334 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.59■□□□□ 0.57
GABREP78334 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GABREP78334 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABREP78334 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.59■□□□□ 0.57
GABREP78334 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABREP78334 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABREP78334 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABREP78334 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABREP78334 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABREP78334 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
GABREP78334 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABREP78334 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABREP78334 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABREP78334 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.58■□□□□ 0.57
GABREP78334 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABREP78334 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABREP78334 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABREP78334 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.58■□□□□ 0.57
GABREP78334 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
GABREP78334 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.58■□□□□ 0.56
GABREP78334 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.58■□□□□ 0.56
GABREP78334 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
GABREP78334 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.58■□□□□ 0.56
GABREP78334 KRT18P48-201ENST00000434763 852 ntBASIC18.58■□□□□ 0.56
GABREP78334 TPM4P1-201ENST00000436100 807 ntBASIC18.58■□□□□ 0.56
GABREP78334 AC007663.1-201ENST00000438948 1240 ntBASIC18.58■□□□□ 0.56
GABREP78334 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.58■□□□□ 0.56
GABREP78334 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
GABREP78334 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.58■□□□□ 0.56
GABREP78334 AC141257.4-201ENST00000634557 245 ntBASIC18.58■□□□□ 0.56
GABREP78334 AC136944.6-201ENST00000634818 245 ntBASIC18.58■□□□□ 0.56
GABREP78334 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.58■□□□□ 0.56
GABREP78334 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.58■□□□□ 0.56
GABREP78334 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
GABREP78334 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
GABREP78334 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GABREP78334 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.58■□□□□ 0.56
GABREP78334 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GABREP78334 AF106564.1-201ENST00000607058 2553 ntBASIC18.57■□□□□ 0.56
GABREP78334 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABREP78334 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABREP78334 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABREP78334 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.57■□□□□ 0.56
GABREP78334 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.57■□□□□ 0.56
GABREP78334 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABREP78334 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
GABREP78334 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.57■□□□□ 0.56
GABREP78334 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.57■□□□□ 0.56
GABREP78334 PCED1CP-201ENST00000419887 785 ntBASIC18.57■□□□□ 0.56
GABREP78334 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.57■□□□□ 0.56
GABREP78334 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.57■□□□□ 0.56
GABREP78334 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABREP78334 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.57■□□□□ 0.56
GABREP78334 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
GABREP78334 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.57■□□□□ 0.56
GABREP78334 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.57■□□□□ 0.56
GABREP78334 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABREP78334 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GABREP78334 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABREP78334 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABREP78334 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GABREP78334 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABREP78334 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms