Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN2P57739 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN2P57739 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN2P57739 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLDN2P57739 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLDN2P57739 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN2P57739 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN2P57739 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLDN2P57739 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN2P57739 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN2P57739 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLDN2P57739 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN2P57739 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN2P57739 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN2P57739 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.31■□□□□ 0.68
CLDN2P57739 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN2P57739 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN2P57739 CRYGFP-201ENST00000418459 633 ntBASIC19.31■□□□□ 0.68
CLDN2P57739 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.31■□□□□ 0.68
CLDN2P57739 AC008040.2-201ENST00000461049 708 ntBASIC19.31■□□□□ 0.68
CLDN2P57739 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN2P57739 AC097488.1-201ENST00000507834 756 ntBASIC19.31■□□□□ 0.68
CLDN2P57739 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN2P57739 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN2P57739 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.31■□□□□ 0.68
CLDN2P57739 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.31■□□□□ 0.68
CLDN2P57739 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLDN2P57739 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 KRT8P8-201ENST00000434750 1448 ntBASIC19.31■□□□□ 0.68
CLDN2P57739 RCC2P6-201ENST00000526625 1557 ntBASIC19.31■□□□□ 0.68
CLDN2P57739 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN2P57739 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLDN2P57739 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 AL162377.1-201ENST00000618844 1793 ntBASIC19.3■□□□□ 0.68
CLDN2P57739 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN2P57739 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN2P57739 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.3■□□□□ 0.68
CLDN2P57739 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.3■□□□□ 0.68
CLDN2P57739 AC011298.2-201ENST00000617989 482 ntBASIC19.3■□□□□ 0.68
CLDN2P57739 AC130371.2-201ENST00000619443 611 ntBASIC19.3■□□□□ 0.68
CLDN2P57739 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN2P57739 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLDN2P57739 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN2P57739 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN2P57739 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN2P57739 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN2P57739 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN2P57739 KRT18P22-201ENST00000402024 1347 ntBASIC19.29■□□□□ 0.68
CLDN2P57739 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN2P57739 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN2P57739 AL157384.1-201ENST00000445995 2473 ntBASIC19.29■□□□□ 0.68
CLDN2P57739 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN2P57739 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN2P57739 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN2P57739 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN2P57739 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN2P57739 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN2P57739 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN2P57739 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
CLDN2P57739 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CLDN2P57739 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN2P57739 KRT18P57-201ENST00000443599 1254 ntBASIC19.29■□□□□ 0.68
CLDN2P57739 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN2P57739 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN2P57739 SLC25A1P4-201ENST00000567977 778 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms