Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH15P55291 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH15P55291 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 AC068880.1-201ENST00000507289 2297 ntBASIC18.18■□□□□ 0.5
CDH15P55291 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDH15P55291 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH15P55291 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDH15P55291 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.18■□□□□ 0.5
CDH15P55291 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH15P55291 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.18■□□□□ 0.5
CDH15P55291 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDH15P55291 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH15P55291 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH15P55291 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH15P55291 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH15P55291 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH15P55291 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH15P55291 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH15P55291 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDH15P55291 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDH15P55291 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CDH15P55291 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH15P55291 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDH15P55291 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH15P55291 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH15P55291 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH15P55291 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDH15P55291 NOC2LP2-201ENST00000407594 1944 ntBASIC18.16■□□□□ 0.5
CDH15P55291 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH15P55291 TPRG1LP1-201ENST00000598702 760 ntBASIC18.16■□□□□ 0.5
CDH15P55291 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDH15P55291 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDH15P55291 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
CDH15P55291 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDH15P55291 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH15P55291 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH15P55291 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH15P55291 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH15P55291 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH15P55291 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDH15P55291 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDH15P55291 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH15P55291 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH15P55291 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH15P55291 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH15P55291 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
CDH15P55291 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH15P55291 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH15P55291 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH15P55291 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH15P55291 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms