Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.56■□□□□ 0.88
PCK1P35558 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.56■□□□□ 0.88
PCK1P35558 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCK1P35558 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCK1P35558 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCK1P35558 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCK1P35558 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCK1P35558 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.55■□□□□ 0.88
PCK1P35558 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.55■□□□□ 0.88
PCK1P35558 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCK1P35558 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCK1P35558 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.55■□□□□ 0.88
PCK1P35558 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.55■□□□□ 0.88
PCK1P35558 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.55■□□□□ 0.88
PCK1P35558 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCK1P35558 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCK1P35558 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCK1P35558 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCK1P35558 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCK1P35558 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
PCK1P35558 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.55■□□□□ 0.88
PCK1P35558 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PCK1P35558 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PCK1P35558 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.54■□□□□ 0.88
PCK1P35558 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCK1P35558 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
PCK1P35558 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 HLA-L-209ENST00000420110 1011 ntBASIC20.54■□□□□ 0.88
PCK1P35558 RPS2P52-201ENST00000469610 820 ntBASIC20.54■□□□□ 0.88
PCK1P35558 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.54■□□□□ 0.88
PCK1P35558 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
PCK1P35558 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCK1P35558 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCK1P35558 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCK1P35558 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCK1P35558 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCK1P35558 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCK1P35558 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCK1P35558 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCK1P35558 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCK1P35558 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.53■□□□□ 0.88
PCK1P35558 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.53■□□□□ 0.88
PCK1P35558 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.53■□□□□ 0.88
PCK1P35558 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCK1P35558 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCK1P35558 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCK1P35558 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCK1P35558 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PCK1P35558 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
PCK1P35558 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.53■□□□□ 0.88
PCK1P35558 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCK1P35558 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCK1P35558 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.53■□□□□ 0.88
PCK1P35558 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCK1P35558 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCK1P35558 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCK1P35558 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCK1P35558 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PCK1P35558 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.52■□□□□ 0.88
PCK1P35558 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.52■□□□□ 0.88
PCK1P35558 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCK1P35558 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCK1P35558 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCK1P35558 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCK1P35558 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCK1P35558 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.52■□□□□ 0.88
PCK1P35558 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.52■□□□□ 0.88
PCK1P35558 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.52■□□□□ 0.88
PCK1P35558 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.52■□□□□ 0.88
PCK1P35558 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.52■□□□□ 0.88
PCK1P35558 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.52■□□□□ 0.88
PCK1P35558 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.52■□□□□ 0.88
PCK1P35558 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
PCK1P35558 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCK1P35558 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCK1P35558 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.52■□□□□ 0.88
PCK1P35558 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCK1P35558 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.52■□□□□ 0.87
PCK1P35558 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.52■□□□□ 0.87
PCK1P35558 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
PCK1P35558 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCK1P35558 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCK1P35558 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCK1P35558 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCK1P35558 AC124283.5-201ENST00000624661 1809 ntBASIC20.51■□□□□ 0.87
PCK1P35558 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.51■□□□□ 0.87
PCK1P35558 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCK1P35558 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCK1P35558 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCK1P35558 ID1-201ENST00000376105 1233 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms