Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN1P35523 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.17■■□□□ 1.14
CLCN1P35523 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN1P35523 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CLCN1P35523 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN1P35523 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN1P35523 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN1P35523 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC22.17■■□□□ 1.14
CLCN1P35523 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN1P35523 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN1P35523 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CLCN1P35523 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CLCN1P35523 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.17■■□□□ 1.14
CLCN1P35523 KRT18P20-201ENST00000548986 1279 ntBASIC22.17■■□□□ 1.14
CLCN1P35523 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.17■■□□□ 1.14
CLCN1P35523 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN1P35523 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN1P35523 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.17■■□□□ 1.14
CLCN1P35523 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
CLCN1P35523 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CLCN1P35523 FST-202ENST00000396947 2538 ntTSL 5 BASIC22.17■■□□□ 1.14
CLCN1P35523 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.17■■□□□ 1.14
CLCN1P35523 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN1P35523 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCN1P35523 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.17■■□□□ 1.14
CLCN1P35523 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 AC141586.5-201ENST00000624546 2050 ntBASIC22.16■■□□□ 1.14
CLCN1P35523 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.16■■□□□ 1.14
CLCN1P35523 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC22.16■■□□□ 1.14
CLCN1P35523 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CLCN1P35523 AC034268.1-201ENST00000441047 882 ntBASIC22.16■■□□□ 1.14
CLCN1P35523 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.16■■□□□ 1.14
CLCN1P35523 AC120498.10-201ENST00000621827 505 ntBASIC22.16■■□□□ 1.14
CLCN1P35523 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.16■■□□□ 1.14
CLCN1P35523 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
CLCN1P35523 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC22.16■■□□□ 1.14
CLCN1P35523 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLCN1P35523 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN1P35523 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22.15■■□□□ 1.14
CLCN1P35523 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN1P35523 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN1P35523 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN1P35523 AC026271.2-201ENST00000428091 497 ntBASIC22.15■■□□□ 1.14
CLCN1P35523 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.15■■□□□ 1.14
CLCN1P35523 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.15■■□□□ 1.14
CLCN1P35523 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN1P35523 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CLCN1P35523 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN1P35523 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN1P35523 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN1P35523 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLCN1P35523 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
CLCN1P35523 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.14■■□□□ 1.14
CLCN1P35523 AC011484.1-201ENST00000377652 1995 ntBASIC22.14■■□□□ 1.14
CLCN1P35523 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLCN1P35523 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLCN1P35523 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.14■■□□□ 1.14
CLCN1P35523 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCN1P35523 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.14■■□□□ 1.13
CLCN1P35523 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCN1P35523 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.14■■□□□ 1.13
CLCN1P35523 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.14■■□□□ 1.13
CLCN1P35523 NTF6G-201ENST00000591094 616 ntBASIC22.14■■□□□ 1.13
CLCN1P35523 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC22.14■■□□□ 1.13
CLCN1P35523 MKRN4P-201ENST00000444706 1521 ntBASIC22.14■■□□□ 1.13
CLCN1P35523 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCN1P35523 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCN1P35523 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCN1P35523 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCN1P35523 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCN1P35523 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLCN1P35523 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CLCN1P35523 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.13■■□□□ 1.13
CLCN1P35523 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC22.13■■□□□ 1.13
CLCN1P35523 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CLCN1P35523 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.13■■□□□ 1.13
CLCN1P35523 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms