Protein–RNA interactions for Protein: P27797

CALR, Calreticulin, humanhuman

Known RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALRP27797 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CALRP27797 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALRP27797 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.64■□□□□ 0.57
CALRP27797 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALRP27797 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CALRP27797 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
CALRP27797 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
CALRP27797 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.64■□□□□ 0.57
CALRP27797 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALRP27797 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.63■□□□□ 0.57
CALRP27797 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CALRP27797 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALRP27797 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALRP27797 AC020907.5-201ENST00000624372 1936 ntBASIC18.63■□□□□ 0.57
CALRP27797 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.63■□□□□ 0.57
CALRP27797 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALRP27797 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALRP27797 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.63■□□□□ 0.57
CALRP27797 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.63■□□□□ 0.57
CALRP27797 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALRP27797 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.63■□□□□ 0.57
CALRP27797 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALRP27797 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CALRP27797 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALRP27797 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CALRP27797 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CALRP27797 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALRP27797 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CALRP27797 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALRP27797 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALRP27797 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CALRP27797 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CALRP27797 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.62■□□□□ 0.57
CALRP27797 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.62■□□□□ 0.57
CALRP27797 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CALRP27797 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CALRP27797 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.62■□□□□ 0.57
CALRP27797 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALRP27797 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.61■□□□□ 0.57
CALRP27797 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CALRP27797 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.61■□□□□ 0.57
CALRP27797 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.61■□□□□ 0.57
CALRP27797 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.61■□□□□ 0.57
CALRP27797 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.61■□□□□ 0.57
CALRP27797 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.61■□□□□ 0.57
CALRP27797 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.61■□□□□ 0.57
CALRP27797 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.61■□□□□ 0.57
CALRP27797 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.61■□□□□ 0.57
CALRP27797 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CALRP27797 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.61■□□□□ 0.57
CALRP27797 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALRP27797 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CALRP27797 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CALRP27797 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.6■□□□□ 0.57
CALRP27797 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.6■□□□□ 0.57
CALRP27797 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.6■□□□□ 0.57
CALRP27797 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.6■□□□□ 0.57
CALRP27797 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.6■□□□□ 0.57
CALRP27797 AL031848.2-201ENST00000607670 837 ntBASIC18.6■□□□□ 0.57
CALRP27797 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.6■□□□□ 0.57
CALRP27797 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CALRP27797 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.6■□□□□ 0.57
CALRP27797 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALRP27797 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.6■□□□□ 0.57
CALRP27797 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms