Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.97e-7■■■■□ 23.5
U2AF2P26368 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.947e-7■■■■□ 23.5
U2AF2P26368 ZZZ3-210ENST00000476275 4737 ntTSL 26.44□□□□□ -1.382e-7■■■■□ 23.5
U2AF2P26368 ZZZ3-211ENST00000481346 4500 ntTSL 1 (best)3.83□□□□□ -1.82e-7■■■■□ 23.5
U2AF2P26368 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.08■□□□□ 0.323e-7■■■■□ 23.5
U2AF2P26368 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.313e-7■■■■□ 23.5
U2AF2P26368 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.283e-7■■■■□ 23.5
U2AF2P26368 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.67■□□□□ 0.263e-7■■■■□ 23.5
U2AF2P26368 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.113e-7■■■■□ 23.5
U2AF2P26368 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.083e-7■■■■□ 23.5
U2AF2P26368 PTOV1-215ENST00000600793 426 ntTSL 514.2□□□□□ -0.142e-10■■■■□ 23.5
U2AF2P26368 CENPE-204ENST00000509120 792 ntTSL 32.94□□□□□ -1.943e-11■■■■□ 23.5
U2AF2P26368 CP-210ENST00000481169 3411 ntTSL 27.88□□□□□ -1.152e-6■■■■□ 23.5
U2AF2P26368 CP-212ENST00000490639 3105 ntTSL 1 (best)6.2□□□□□ -1.422e-6■■■■□ 23.5
U2AF2P26368 CP-213ENST00000494544 2806 ntTSL 1 (best)5.66□□□□□ -1.52e-6■■■■□ 23.5
U2AF2P26368 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.62e-6■■■■□ 23.5
U2AF2P26368 ZNF330-203ENST00000506302 1180 ntTSL 213.87□□□□□ -0.194e-7■■■■□ 23.5
U2AF2P26368 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.322e-6■■■■□ 23.5
U2AF2P26368 ZNF330-201ENST00000262990 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.345e-7■■■■□ 23.5
U2AF2P26368 ZNF330-204ENST00000507532 836 ntTSL 311.72□□□□□ -0.534e-7■■■■□ 23.5
U2AF2P26368 ZNF330-205ENST00000512738 552 ntTSL 411.52□□□□□ -0.574e-7■■■■□ 23.5
U2AF2P26368 ZNF330-206ENST00000512809 838 ntTSL 310.86□□□□□ -0.674e-7■■■■□ 23.5
U2AF2P26368 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC10.74□□□□□ -0.694e-6■■■■□ 23.5
U2AF2P26368 MED1-203ENST00000577831 4584 ntTSL 210.07□□□□□ -0.84e-6■■■■□ 23.5
U2AF2P26368 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.144e-6■■■■□ 23.5
U2AF2P26368 MALRD1-201ENST00000377265 1761 ntTSL 27.59□□□□□ -1.194e-6■■■■□ 23.5
U2AF2P26368 ZNF330-202ENST00000503649 573 ntTSL 55.73□□□□□ -1.494e-7■■■■□ 23.5
U2AF2P26368 ACSF2-218ENST00000510410 1745 ntTSL 228.56■■■□□ 2.161e-9■■■■□ 23.5
U2AF2P26368 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.91■■□□□ 1.91e-9■■■■□ 23.5
U2AF2P26368 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.53■■□□□ 1.681e-9■■■■□ 23.5
U2AF2P26368 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.051e-9■■■■□ 23.5
U2AF2P26368 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.98■□□□□ 0.311e-9■■■■□ 23.5
U2AF2P26368 ACSF2-223ENST00000513101 564 ntTSL 410.02□□□□□ -0.811e-9■■■■□ 23.5
U2AF2P26368 NAA40-203ENST00000534965 958 ntTSL 216.78■□□□□ 0.282e-18■■■■□ 23.5
U2AF2P26368 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.54■□□□□ 0.242e-18■■■■□ 23.5
U2AF2P26368 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.93■□□□□ 0.142e-18■■■■□ 23.5
U2AF2P26368 NAA40-208ENST00000544138 808 ntTSL 415.07■□□□□ 02e-18■■■■□ 23.5
U2AF2P26368 NAA40-204ENST00000536939 567 ntTSL 213.47□□□□□ -0.252e-18■■■■□ 23.5
U2AF2P26368 NAA40-201ENST00000338447 4707 ntTSL 1 (best)11.46□□□□□ -0.582e-18■■■■□ 23.5
U2AF2P26368 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.882e-18■■■■□ 23.5
U2AF2P26368 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.13■□□□□ 0.811e-6■■■■□ 23.5
U2AF2P26368 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.811e-6■■■■□ 23.5
U2AF2P26368 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC15.13■□□□□ 0.011e-6■■■■□ 23.5
U2AF2P26368 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.82□□□□□ -1.481e-6■■■■□ 23.5
U2AF2P26368 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.871e-6■■■■□ 23.5
U2AF2P26368 MCCC2-208ENST00000512218 2127 ntTSL 219.09■□□□□ 0.656e-8■■■■□ 23.5
U2AF2P26368 MCCC2-201ENST00000340941 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.146e-8■■■■□ 23.5
U2AF2P26368 MCCC2-206ENST00000509539 895 ntTSL 311.42□□□□□ -0.586e-8■■■■□ 23.5
U2AF2P26368 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.97■□□□□ 0.477e-8■■■■□ 23.5
U2AF2P26368 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC16.33■□□□□ 0.27e-8■■■■□ 23.5
U2AF2P26368 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC16.3■□□□□ 0.27e-8■■■■□ 23.5
U2AF2P26368 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC15□□□□□ -0.017e-8■■■■□ 23.5
U2AF2P26368 ACIN1-217ENST00000555566 734 ntTSL 313.67□□□□□ -0.227e-8■■■■□ 23.5
U2AF2P26368 ACIN1-206ENST00000473758 3540 ntTSL 1 (best)12.87□□□□□ -0.357e-8■■■■□ 23.5
U2AF2P26368 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.4□□□□□ -1.231e-6■■■■□ 23.5
U2AF2P26368 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.266e-7■■■■□ 23.5
U2AF2P26368 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC13.22□□□□□ -0.296e-7■■■■□ 23.5
U2AF2P26368 GTF3C3-206ENST00000448539 796 ntTSL 315.83■□□□□ 0.129e-7■■■■□ 23.5
U2AF2P26368 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.27□□□□□ -1.259e-7■■■■□ 23.5
U2AF2P26368 GTF3C3-208ENST00000455546 547 ntTSL 45.14□□□□□ -1.599e-7■■■■□ 23.5
U2AF2P26368 GTF3C3-207ENST00000451088 488 ntTSL 34.25□□□□□ -1.739e-7■■■■□ 23.5
U2AF2P26368 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.11e-6■■■■□ 23.5
U2AF2P26368 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.554e-8■■■■□ 23.5
U2AF2P26368 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC16.18■□□□□ 0.182e-8■■■■□ 23.5
U2AF2P26368 LINC00174-206ENST00000438894 534 ntTSL 413.04□□□□□ -0.322e-8■■■■□ 23.5
U2AF2P26368 LINC00174-203ENST00000416572 556 ntTSL 410.71□□□□□ -0.692e-8■■■■□ 23.5
U2AF2P26368 C2CD5-201ENST00000333957 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.51e-6■■■■□ 23.5
U2AF2P26368 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC9.5□□□□□ -0.891e-6■■■■□ 23.5
U2AF2P26368 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.07□□□□□ -1.121e-6■■■■□ 23.5
U2AF2P26368 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.79□□□□□ -1.161e-6■■■■□ 23.5
U2AF2P26368 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.79□□□□□ -1.161e-6■■■■□ 23.5
U2AF2P26368 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.79□□□□□ -1.161e-6■■■■□ 23.5
U2AF2P26368 RAB17-208ENST00000430445 421 ntTSL 514.94□□□□□ -0.022e-15■■■■□ 23.5
U2AF2P26368 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.82■■□□□ 1.082e-7■■■■□ 23.5
U2AF2P26368 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.47■□□□□ 0.872e-7■■■■□ 23.5
U2AF2P26368 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.442e-7■■■■□ 23.5
U2AF2P26368 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.22e-7■■■■□ 23.5
U2AF2P26368 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.032e-7■■■■□ 23.5
U2AF2P26368 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.71■□□□□ 0.12e-6■■■■□ 23.4
U2AF2P26368 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.762e-6■■■■□ 23.4
U2AF2P26368 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.222e-14■■■■□ 23.4
U2AF2P26368 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.022e-14■■■■□ 23.4
U2AF2P26368 INO80-211ENST00000616814 4272 ntTSL 5 BASIC14.24□□□□□ -0.132e-14■■■■□ 23.4
U2AF2P26368 INO80-205ENST00000558357 5503 ntTSL 1 (best)12.66□□□□□ -0.382e-14■■■■□ 23.4
U2AF2P26368 INO80-204ENST00000558270 888 ntTSL 212.27□□□□□ -0.452e-14■■■■□ 23.4
U2AF2P26368 INO80-207ENST00000560689 580 ntTSL 310.88□□□□□ -0.672e-14■■■■□ 23.4
U2AF2P26368 CLMN-209ENST00000557696 746 ntTSL 211.2□□□□□ -0.627e-7■■■■□ 23.4
U2AF2P26368 ETV5-213ENST00000489830 614 ntTSL 28.51□□□□□ -1.051e-8■■■■□ 23.4
U2AF2P26368 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.37■■□□□ 1.659e-8■■■■□ 23.4
U2AF2P26368 PABPN1-205ENST00000555295 406 ntTSL 314.19□□□□□ -0.145e-18■■■■□ 23.4
U2AF2P26368 OPA1-206ENST00000392436 757 ntTSL 316.96■□□□□ 0.318e-10■■■■□ 23.4
U2AF2P26368 OPA1-216ENST00000487986 563 ntTSL 47.53□□□□□ -1.28e-10■■■■□ 23.4
U2AF2P26368 OPA1-219ENST00000497189 562 ntTSL 47.31□□□□□ -1.248e-10■■■■□ 23.4
U2AF2P26368 OPA1-211ENST00000434811 554 ntTSL 41.37□□□□□ -2.198e-10■■■■□ 23.4
U2AF2P26368 PUM1-221ENST00000530669 582 ntTSL 312.23□□□□□ -0.459e-15■■■■□ 23.4
U2AF2P26368 NUF2-210ENST00000527439 940 ntTSL 32.6□□□□□ -1.993e-7■■■■□ 23.4
U2AF2P26368 NUF2-209ENST00000527120 351 ntTSL 3-0.01□□□□□ -2.413e-7■■■■□ 23.4
U2AF2P26368 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.431e-6■■■■□ 23.4
U2AF2P26368 KCTD3-202ENST00000448333 751 ntTSL 210.67□□□□□ -0.79e-8■■■■□ 23.4
U2AF2P26368 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.52■□□□□ 0.555e-8■■■■□ 23.4
Retrieved 100 of 36,523 protein–RNA pairs in 257.1 ms