RNA–Protein interactions for RNA: ENST00000527439.5

NUF2-210, Transcript of NUF2, NDC80 kinetochore complex component, humanhuman

TSL 3

Gene NUF2, Length 940 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUF2-210ENST00000527439 AEBP2Q6ZN18 517 aaPredicted RBP28.87■■■□□ 2.21
NUF2-210ENST00000527439 CHIC1Q5VXU3 224 aa27.35■■□□□ 1.97
NUF2-210ENST00000527439 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
NUF2-210ENST00000527439 PHF23Q9BUL5 403 aaPredicted RBP24.24■■□□□ 1.47
NUF2-210ENST00000527439 FOXD1Q16676 465 aa22.92■■□□□ 1.26
NUF2-210ENST00000527439 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
NUF2-210ENST00000527439 PPP6R1Q9UPN7 881 aa21.47■■□□□ 1.03
NUF2-210ENST00000527439 PIAS4Q8N2W9 510 aaPredicted RBP21.4■■□□□ 1.02
NUF2-210ENST00000527439 ADRA2BP18089 450 aa21.39■■□□□ 1.01
NUF2-210ENST00000527439 MSH5O43196 834 aa21.37■■□□□ 1.01
NUF2-210ENST00000527439 POTEDQ86YR6 584 aa20.93■□□□□ 0.94
NUF2-210ENST00000527439 MAPK8IP2Q13387 824 aaPredicted RBP19.65■□□□□ 0.74
NUF2-210ENST00000527439 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
NUF2-210ENST00000527439 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
NUF2-210ENST00000527439 PPP4R3CPQ6ZMV5 832 aa19.16■□□□□ 0.66
NUF2-210ENST00000527439 CNKSR2Q8WXI2 1034 aa18.77■□□□□ 0.6
NUF2-210ENST00000527439 HOXD11P31277 338 aaPredicted RBP18.75■□□□□ 0.59
NUF2-210ENST00000527439 DCAF8L1A6NGE4 600 aa18.68■□□□□ 0.58
NUF2-210ENST00000527439 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
NUF2-210ENST00000527439 CACNB1Q02641 598 aaPredicted RBP18.37■□□□□ 0.53
NUF2-210ENST00000527439 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
NUF2-210ENST00000527439 RNF39Q9H2S5 420 aa18.29■□□□□ 0.52
NUF2-210ENST00000527439 NPM3O75607 178 aaKnown RBP18.18■□□□□ 0.5
NUF2-210ENST00000527439 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
NUF2-210ENST00000527439 C1QBPQ07021 282 aaKnown RBP17.97■□□□□ 0.47
NUF2-210ENST00000527439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
NUF2-210ENST00000527439 KCNA4P22459 653 aa17.85■□□□□ 0.45
NUF2-210ENST00000527439 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
NUF2-210ENST00000527439 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
NUF2-210ENST00000527439 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
NUF2-210ENST00000527439 CAPN15O75808 1086 aa17.21■□□□□ 0.35
NUF2-210ENST00000527439 DSG3P32926 999 aa17.13■□□□□ 0.33
NUF2-210ENST00000527439 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
NUF2-210ENST00000527439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.92■□□□□ 0.3
NUF2-210ENST00000527439 HNRNPUL2Q1KMD3 747 aaKnown RBP16.92■□□□□ 0.3
NUF2-210ENST00000527439 APLP2Q06481 763 aa16.91■□□□□ 0.3
NUF2-210ENST00000527439 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
NUF2-210ENST00000527439 ABCB7O75027 752 aa16.86■□□□□ 0.29
NUF2-210ENST00000527439 SAMD1Q6SPF0 538 aaPredicted RBP16.86■□□□□ 0.29
NUF2-210ENST00000527439 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
NUF2-210ENST00000527439 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
NUF2-210ENST00000527439 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
NUF2-210ENST00000527439 POLA2Q14181 598 aa16.49■□□□□ 0.23
NUF2-210ENST00000527439 ATF5Q9Y2D1 282 aaPredicted RBP16.47■□□□□ 0.23
NUF2-210ENST00000527439 ZBTB22O15209 634 aa16.46■□□□□ 0.23
NUF2-210ENST00000527439 POTEHQ6S545 545 aa16.38■□□□□ 0.21
NUF2-210ENST00000527439 RBM42Q9BTD8 480 aaKnown RBP16.27■□□□□ 0.2
NUF2-210ENST00000527439 ZBTB12Q9Y330 459 aaPredicted RBP16.1■□□□□ 0.17
NUF2-210ENST00000527439 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
NUF2-210ENST00000527439 OSCARQ8IYS5 282 aa16■□□□□ 0.15
NUF2-210ENST00000527439 CHRDL2Q6WN34 429 aa15.98■□□□□ 0.15
NUF2-210ENST00000527439 AKT1S1Q96B36 256 aa15.93■□□□□ 0.14
NUF2-210ENST00000527439 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
NUF2-210ENST00000527439 FBLN2P98095 1184 aa15.71■□□□□ 0.11
NUF2-210ENST00000527439 MKRN4PQ13434 485 aaPredicted RBP15.7■□□□□ 0.1
NUF2-210ENST00000527439 PITPNM1O00562 1244 aa15.67■□□□□ 0.1
NUF2-210ENST00000527439 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
NUF2-210ENST00000527439 SPDYE2BA6NHP3 402 aa15.63■□□□□ 0.09
NUF2-210ENST00000527439 SPDYE6P0CI01 402 aa15.63■□□□□ 0.09
NUF2-210ENST00000527439 SPDYE2Q495Y8 402 aa15.63■□□□□ 0.09
NUF2-210ENST00000527439 PIP4P2Q8N4L2 257 aa15.63■□□□□ 0.09
NUF2-210ENST00000527439 FXR2P51116 673 aaKnown RBP eCLIP15.5■□□□□ 0.07
NUF2-210ENST00000527439 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
NUF2-210ENST00000527439 SSUH2Q9Y2M2 353 aa15.46■□□□□ 0.07
NUF2-210ENST00000527439 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
NUF2-210ENST00000527439 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
NUF2-210ENST00000527439 SPDYE1Q8NFV5 336 aaPredicted RBP15.35■□□□□ 0.05
NUF2-210ENST00000527439 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
NUF2-210ENST00000527439 HAX1O00165 279 aa15.3■□□□□ 0.04
NUF2-210ENST00000527439 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
NUF2-210ENST00000527439 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
NUF2-210ENST00000527439 EVX2Q03828 476 aa15.19■□□□□ 0.02
NUF2-210ENST00000527439 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
NUF2-210ENST00000527439 PRR29P0C7W0 189 aa15.08■□□□□ 0
NUF2-210ENST00000527439 C19orf67A6NJJ6 358 aa15.01□□□□□ -0.01
NUF2-210ENST00000527439 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
NUF2-210ENST00000527439 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
NUF2-210ENST00000527439 GABBR2O75899 941 aa14.79□□□□□ -0.04
NUF2-210ENST00000527439 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
NUF2-210ENST00000527439 CREBZFQ9NS37 354 aa14.75□□□□□ -0.05
NUF2-210ENST00000527439 STAG3Q9UJ98 1225 aa14.75□□□□□ -0.05
NUF2-210ENST00000527439 PROM2Q8N271 834 aa14.57□□□□□ -0.08
NUF2-210ENST00000527439 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
NUF2-210ENST00000527439 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
NUF2-210ENST00000527439 ZNF579Q8NAF0 562 aaKnown RBP14.52□□□□□ -0.09
NUF2-210ENST00000527439 MNX1P50219 401 aaPredicted RBP14.51□□□□□ -0.09
NUF2-210ENST00000527439 CLCN6P51797 869 aa14.44□□□□□ -0.1
NUF2-210ENST00000527439 NPM1P06748 294 aaKnown RBP eCLIP14.4□□□□□ -0.1
NUF2-210ENST00000527439 LHX8Q68G74 356 aa14.39□□□□□ -0.11
NUF2-210ENST00000527439 PHF12Q96QT6 1004 aa14.39□□□□□ -0.11
NUF2-210ENST00000527439 GALR2O43603 387 aaPredicted RBP14.38□□□□□ -0.11
NUF2-210ENST00000527439 PAK3O75914 559 aaPredicted RBP14.37□□□□□ -0.11
NUF2-210ENST00000527439 DCBLD2Q96PD2 775 aa14.35□□□□□ -0.11
NUF2-210ENST00000527439 TSPYL2Q9H2G4 693 aaPredicted RBP14.21□□□□□ -0.13
NUF2-210ENST00000527439 MIER1Q8N108 512 aa14.2□□□□□ -0.14
NUF2-210ENST00000527439 FKBP8Q14318 412 aa14.18□□□□□ -0.14
NUF2-210ENST00000527439 MS4A3Q96HJ5 214 aa14.18□□□□□ -0.14
NUF2-210ENST00000527439 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
NUF2-210ENST00000527439 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
NUF2-210ENST00000527439 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms