RNA–Protein interactions for RNA: ENST00000509120.1

CENPE-204, Transcript of centromere protein E, humanhuman

TSL 3

Gene CENPE, Length 792 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-204ENST00000509120 AEBP2Q6ZN18 517 aaPredicted RBP31.78■■■□□ 2.68
CENPE-204ENST00000509120 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
CENPE-204ENST00000509120 SENP3Q9H4L4 574 aaPredicted RBP27.38■■□□□ 1.97
CENPE-204ENST00000509120 PHF23Q9BUL5 403 aaPredicted RBP26.83■■□□□ 1.89
CENPE-204ENST00000509120 FOXD1Q16676 465 aa25.58■■□□□ 1.69
CENPE-204ENST00000509120 POTEDQ86YR6 584 aa25.57■■□□□ 1.68
CENPE-204ENST00000509120 MSH5O43196 834 aa24.43■■□□□ 1.5
CENPE-204ENST00000509120 PLPPR3Q6T4P5 718 aa24.34■■□□□ 1.49
CENPE-204ENST00000509120 PIAS4Q8N2W9 510 aaPredicted RBP23.72■■□□□ 1.39
CENPE-204ENST00000509120 PPP6R1Q9UPN7 881 aa23.61■■□□□ 1.37
CENPE-204ENST00000509120 ADRA2BP18089 450 aa23.52■■□□□ 1.36
CENPE-204ENST00000509120 CACNB1Q02641 598 aaPredicted RBP21.62■■□□□ 1.05
CENPE-204ENST00000509120 DMRT2Q9Y5R5 561 aa21.51■■□□□ 1.03
CENPE-204ENST00000509120 PPP4R3CPQ6ZMV5 832 aa21.47■■□□□ 1.03
CENPE-204ENST00000509120 MAPK8IP2Q13387 824 aaPredicted RBP21.46■■□□□ 1.03
CENPE-204ENST00000509120 SCAF1Q9H7N4 1312 aaKnown RBP21.32■■□□□ 1
CENPE-204ENST00000509120 CNKSR2Q8WXI2 1034 aa20.88■□□□□ 0.93
CENPE-204ENST00000509120 DCAF8L1A6NGE4 600 aa20.78■□□□□ 0.92
CENPE-204ENST00000509120 KCNA4P22459 653 aa20.69■□□□□ 0.9
CENPE-204ENST00000509120 NCBP3Q53F19 620 aaKnown RBP20.69■□□□□ 0.9
CENPE-204ENST00000509120 RNF39Q9H2S5 420 aa20.68■□□□□ 0.9
CENPE-204ENST00000509120 HOXD11P31277 338 aaPredicted RBP20.6■□□□□ 0.89
CENPE-204ENST00000509120 RNF216Q9NWF9 866 aaPredicted RBP20.56■□□□□ 0.88
CENPE-204ENST00000509120 NPM3O75607 178 aaKnown RBP20.55■□□□□ 0.88
CENPE-204ENST00000509120 C1QBPQ07021 282 aaKnown RBP20.37■□□□□ 0.85
CENPE-204ENST00000509120 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
CENPE-204ENST00000509120 POTEHQ6S545 545 aa19.86■□□□□ 0.77
CENPE-204ENST00000509120 SLC4A1APQ9BWU0 796 aaKnown RBP19.57■□□□□ 0.72
CENPE-204ENST00000509120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.53■□□□□ 0.728e-6■■■□□ 19
CENPE-204ENST00000509120 SLC4A2P04920 1241 aa19.52■□□□□ 0.72
CENPE-204ENST00000509120 U3KPZ7 1027 aaPredicted RBP19.3■□□□□ 0.68
CENPE-204ENST00000509120 ZBTB22O15209 634 aa19.11■□□□□ 0.65
CENPE-204ENST00000509120 FOXD4L1Q9NU39 408 aa19.05■□□□□ 0.64
CENPE-204ENST00000509120 DSG3P32926 999 aa19.02■□□□□ 0.64
CENPE-204ENST00000509120 CAPN15O75808 1086 aa18.95■□□□□ 0.62
CENPE-204ENST00000509120 MYCNP04198 464 aaPredicted RBP18.91■□□□□ 0.62
CENPE-204ENST00000509120 SPINK5Q9NQ38 1064 aaPredicted RBP18.86■□□□□ 0.61
CENPE-204ENST00000509120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
CENPE-204ENST00000509120 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
CENPE-204ENST00000509120 SAMD1Q6SPF0 538 aaPredicted RBP18.74■□□□□ 0.59
CENPE-204ENST00000509120 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
CENPE-204ENST00000509120 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
CENPE-204ENST00000509120 APLP2Q06481 763 aa18.59■□□□□ 0.57
CENPE-204ENST00000509120 ATF5Q9Y2D1 282 aaPredicted RBP18.57■□□□□ 0.56
CENPE-204ENST00000509120 TRHP20396 242 aaPredicted RBP18.54■□□□□ 0.56
CENPE-204ENST00000509120 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
CENPE-204ENST00000509120 ABCB7O75027 752 aa18.4■□□□□ 0.54
CENPE-204ENST00000509120 ATXN8OSP0DMR3 200 aa18.38■□□□□ 0.53
CENPE-204ENST00000509120 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
CENPE-204ENST00000509120 CHRDL2Q6WN34 429 aa18.24■□□□□ 0.51
CENPE-204ENST00000509120 POLA2Q14181 598 aa18.2■□□□□ 0.5
CENPE-204ENST00000509120 SP7Q8TDD2 431 aaPredicted RBP18.13■□□□□ 0.49
CENPE-204ENST00000509120 ZBTB12Q9Y330 459 aaPredicted RBP17.76■□□□□ 0.43
CENPE-204ENST00000509120 MKRN4PQ13434 485 aaPredicted RBP17.74■□□□□ 0.43
CENPE-204ENST00000509120 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
CENPE-204ENST00000509120 FBLN2P98095 1184 aa17.59■□□□□ 0.41
CENPE-204ENST00000509120 HAX1O00165 279 aa17.58■□□□□ 0.4
CENPE-204ENST00000509120 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
CENPE-204ENST00000509120 PIP4P2Q8N4L2 257 aa17.55■□□□□ 0.4
CENPE-204ENST00000509120 REM2Q8IYK8 340 aaPredicted RBP17.39■□□□□ 0.37
CENPE-204ENST00000509120 SPDYE2BA6NHP3 402 aa17.34■□□□□ 0.37
CENPE-204ENST00000509120 SPDYE6P0CI01 402 aa17.34■□□□□ 0.37
CENPE-204ENST00000509120 SPDYE2Q495Y8 402 aa17.34■□□□□ 0.37
CENPE-204ENST00000509120 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.35
CENPE-204ENST00000509120 SSUH2Q9Y2M2 353 aa17.24■□□□□ 0.35
CENPE-204ENST00000509120 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
CENPE-204ENST00000509120 PITPNM1O00562 1244 aa17.22■□□□□ 0.35
CENPE-204ENST00000509120 EVX2Q03828 476 aa17.17■□□□□ 0.34
CENPE-204ENST00000509120 SPDYE4A6NLX3 237 aa17.08■□□□□ 0.32
CENPE-204ENST00000509120 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
CENPE-204ENST00000509120 LHX8Q68G74 356 aa17■□□□□ 0.31
CENPE-204ENST00000509120 SPDYE1Q8NFV5 336 aaPredicted RBP16.87■□□□□ 0.29
CENPE-204ENST00000509120 PLSCR2Q9NRY7 297 aa16.86■□□□□ 0.29
CENPE-204ENST00000509120 FKBP8Q14318 412 aa16.85■□□□□ 0.29
CENPE-204ENST00000509120 PROM2Q8N271 834 aa16.85■□□□□ 0.29
CENPE-204ENST00000509120 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
CENPE-204ENST00000509120 PRKAR2AP13861 404 aaKnown RBP16.79■□□□□ 0.28
CENPE-204ENST00000509120 GABBR2O75899 941 aa16.78■□□□□ 0.28
CENPE-204ENST00000509120 C19orf67A6NJJ6 358 aa16.76■□□□□ 0.27
CENPE-204ENST00000509120 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
CENPE-204ENST00000509120 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
CENPE-204ENST00000509120 CHADLQ6NUI6 762 aa16.54■□□□□ 0.24
CENPE-204ENST00000509120 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
CENPE-204ENST00000509120 POTEIP0CG38 1075 aa16.36■□□□□ 0.21
CENPE-204ENST00000509120 FARP1Q9Y4F1 1045 aaPredicted RBP16.3■□□□□ 0.2
CENPE-204ENST00000509120 MNX1P50219 401 aaPredicted RBP16.29■□□□□ 0.2
CENPE-204ENST00000509120 FBXO3Q9UK99 471 aa16.22■□□□□ 0.19
CENPE-204ENST00000509120 CLCN6P51797 869 aa16.21■□□□□ 0.19
CENPE-204ENST00000509120 CD44P16070 742 aaKnown RBP16.2■□□□□ 0.18
CENPE-204ENST00000509120 MIER1Q8N108 512 aa16.19■□□□□ 0.18
CENPE-204ENST00000509120 DCBLD2Q96PD2 775 aa16.19■□□□□ 0.18
CENPE-204ENST00000509120 VASPP50552 380 aaPredicted RBP16.11■□□□□ 0.17
CENPE-204ENST00000509120 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
CENPE-204ENST00000509120 POTEMA6NI47 508 aa16.07■□□□□ 0.16
CENPE-204ENST00000509120 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.16
CENPE-204ENST00000509120 PLEKHG5O94827 1062 aa16■□□□□ 0.15
CENPE-204ENST00000509120 OTUD5Q96G74 571 aa15.99■□□□□ 0.15
CENPE-204ENST00000509120 POTEGQ6S5H5 508 aa15.98■□□□□ 0.15
CENPE-204ENST00000509120 IFNLR1Q8IU57 520 aaPredicted RBP15.94■□□□□ 0.14
CENPE-204ENST00000509120 NUBP1P53384 320 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms