RNA–Protein interactions for RNA: ENST00000396028.6

C2CD5-202, Transcript of C2 calcium dependent domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene C2CD5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-202ENST00000396028 NISCHQ9Y2I1 1504 aa14.33□□□□□ -0.12
C2CD5-202ENST00000396028 CCDC180Q9P1Z9 1646 aa12.45□□□□□ -0.42
C2CD5-202ENST00000396028 ZCCHC6Q5VYS8 1495 aaKnown RBP12.21□□□□□ -0.45
C2CD5-202ENST00000396028 DCAF1Q9Y4B6 1507 aa12.04□□□□□ -0.48
C2CD5-202ENST00000396028 MYO15BQ96JP2 1530 aa11.71□□□□□ -0.54
C2CD5-202ENST00000396028 ABCC9O60706 1549 aa11.58□□□□□ -0.56
C2CD5-202ENST00000396028 SHROOM4Q9ULL8 1493 aa11.55□□□□□ -0.56
C2CD5-202ENST00000396028 CHIC1Q5VXU3 224 aa11.41□□□□□ -0.58
C2CD5-202ENST00000396028 RB1CC1Q8TDY2 1594 aa11.29□□□□□ -0.6
C2CD5-202ENST00000396028 SUPT5HO00267 1087 aaKnown RBP11.29□□□□□ -0.6
C2CD5-202ENST00000396028 NACADO15069 1562 aa11.28□□□□□ -0.6
C2CD5-202ENST00000396028 EIF4G1Q04637 1599 aaKnown RBP11.28□□□□□ -0.6
C2CD5-202ENST00000396028 RSF1Q96T23 1441 aaPredicted RBP11.25□□□□□ -0.61
C2CD5-202ENST00000396028 SCRIBQ14160 1630 aa11.2□□□□□ -0.62
C2CD5-202ENST00000396028 HRCP23327 699 aa11.18□□□□□ -0.62
C2CD5-202ENST00000396028 UNC13AQ9UPW8 1703 aa11.14□□□□□ -0.63
C2CD5-202ENST00000396028 BAZ1AQ9NRL2 1556 aaPredicted RBP11.13□□□□□ -0.63
C2CD5-202ENST00000396028 MROH2BQ7Z745 1585 aa11.06□□□□□ -0.64
C2CD5-202ENST00000396028 WIZO95785 1651 aa11.05□□□□□ -0.64
C2CD5-202ENST00000396028 CECR2Q9BXF3 1484 aa10.99□□□□□ -0.65
C2CD5-202ENST00000396028 PEG3Q9GZU2 1588 aa10.96□□□□□ -0.66
C2CD5-202ENST00000396028 TOP2AP11388 1531 aaKnown RBP10.95□□□□□ -0.66
C2CD5-202ENST00000396028 SMARCA4P51532 1647 aa10.94□□□□□ -0.66
C2CD5-202ENST00000396028 SMARCA2P51531 1590 aa10.89□□□□□ -0.67
C2CD5-202ENST00000396028 BICRAQ9NZM4 1560 aa10.85□□□□□ -0.67
C2CD5-202ENST00000396028 LOC105371045A0A1W2PR82 267 aa10.85□□□□□ -0.67
C2CD5-202ENST00000396028 TRIM26Q12899 539 aaPredicted RBP10.84□□□□□ -0.67
C2CD5-202ENST00000396028 DCAF8L2P0C7V8 631 aa10.84□□□□□ -0.67
C2CD5-202ENST00000396028 PCGF6Q9BYE7 350 aa10.81□□□□□ -0.68
C2CD5-202ENST00000396028 WRNQ14191 1432 aaPredicted RBP eCLIP10.8□□□□□ -0.68
C2CD5-202ENST00000396028 CCDC88BA6NC98 1476 aa10.75□□□□□ -0.69
C2CD5-202ENST00000396028 KIF21BO75037 1637 aa10.69□□□□□ -0.7
C2CD5-202ENST00000396028 PPARGC1BQ86YN6 1023 aaKnown RBP10.68□□□□□ -0.7
C2CD5-202ENST00000396028 ABCC8Q09428 1581 aa10.67□□□□□ -0.7
C2CD5-202ENST00000396028 EEA1Q15075 1411 aa10.66□□□□□ -0.7
C2CD5-202ENST00000396028 TRIM41Q8WV44 630 aa10.66□□□□□ -0.7
C2CD5-202ENST00000396028 ZEB1P37275 1124 aaPredicted RBP10.65□□□□□ -0.7
C2CD5-202ENST00000396028 BIVM-ERCC5R4GMW8 1640 aa10.64□□□□□ -0.71
C2CD5-202ENST00000396028 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
C2CD5-202ENST00000396028 SYNJ1O43426 1573 aa10.59□□□□□ -0.71
C2CD5-202ENST00000396028 TNIKQ9UKE5 1360 aa10.59□□□□□ -0.71
C2CD5-202ENST00000396028 TOP2BQ02880 1626 aa10.55□□□□□ -0.72
C2CD5-202ENST00000396028 BAZ1BQ9UIG0 1483 aaKnown RBP10.53□□□□□ -0.72
C2CD5-202ENST00000396028 SOGA1O94964 1423 aa10.52□□□□□ -0.73
C2CD5-202ENST00000396028 CEP162Q5TB80 1403 aa10.51□□□□□ -0.73
C2CD5-202ENST00000396028 ATAD2BQ9ULI0 1458 aa10.51□□□□□ -0.73
C2CD5-202ENST00000396028 RUSC2Q8N2Y8 1516 aa10.51□□□□□ -0.73
C2CD5-202ENST00000396028 HMGXB3Q12766 1538 aa10.49□□□□□ -0.73
C2CD5-202ENST00000396028 GOLGA3Q08378 1498 aa10.49□□□□□ -0.73
C2CD5-202ENST00000396028 ERICH3Q5RHP9 1530 aa10.47□□□□□ -0.73
C2CD5-202ENST00000396028 CEP164Q9UPV0 1460 aa10.44□□□□□ -0.74
C2CD5-202ENST00000396028 PRXQ9BXM0 1461 aa10.38□□□□□ -0.75
C2CD5-202ENST00000396028 NCAPD3P42695 1498 aa10.37□□□□□ -0.75
C2CD5-202ENST00000396028 CUX2O14529 1486 aa10.36□□□□□ -0.75
C2CD5-202ENST00000396028 VPS8Q8N3P4 1428 aa10.34□□□□□ -0.75
C2CD5-202ENST00000396028 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
C2CD5-202ENST00000396028 CUX1P39880 1505 aa10.32□□□□□ -0.76
C2CD5-202ENST00000396028 CLIP1P30622 1438 aa10.31□□□□□ -0.76
C2CD5-202ENST00000396028 FAM9AQ8IZU1 332 aaPredicted RBP10.31□□□□□ -0.76
C2CD5-202ENST00000396028 RAPGEF2Q9Y4G8 1499 aa10.31□□□□□ -0.76
C2CD5-202ENST00000396028 AEBP2Q6ZN18 517 aaPredicted RBP10.3□□□□□ -0.76
C2CD5-202ENST00000396028 ARAP1Q96P48 1450 aa10.3□□□□□ -0.76
C2CD5-202ENST00000396028 MAP3K1Q13233 1512 aa10.3□□□□□ -0.76
C2CD5-202ENST00000396028 CFTRP13569 1480 aa10.29□□□□□ -0.76
C2CD5-202ENST00000396028 SCAF1Q9H7N4 1312 aaKnown RBP10.29□□□□□ -0.76
C2CD5-202ENST00000396028 CFAP43Q8NDM7 1665 aa10.24□□□□□ -0.77
C2CD5-202ENST00000396028 RRBP1Q9P2E9 1410 aaKnown RBP10.24□□□□□ -0.77
C2CD5-202ENST00000396028 WDR97A6NE52 1622 aa10.23□□□□□ -0.77
C2CD5-202ENST00000396028 CLSPNQ9HAW4 1339 aa10.19□□□□□ -0.78
C2CD5-202ENST00000396028 PELP1Q8IZL8 1130 aaKnown RBP10.19□□□□□ -0.78
C2CD5-202ENST00000396028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.17□□□□□ -0.78
C2CD5-202ENST00000396028 ACIN1Q9UKV3 1341 aaKnown RBP10.16□□□□□ -0.78
C2CD5-202ENST00000396028 ARHGAP35Q9NRY4 1499 aa10.16□□□□□ -0.78
C2CD5-202ENST00000396028 TIAM1Q13009 1591 aa10.14□□□□□ -0.79
C2CD5-202ENST00000396028 CTTNBP2Q8WZ74 1663 aa10.14□□□□□ -0.79
C2CD5-202ENST00000396028 CC2D2AQ9P2K1 1620 aa10.12□□□□□ -0.79
C2CD5-202ENST00000396028 LRRIQ1Q96JM4 1722 aa10.12□□□□□ -0.79
C2CD5-202ENST00000396028 DHX57Q6P158 1386 aaKnown RBP10.1□□□□□ -0.79
C2CD5-202ENST00000396028 CUL7Q14999 1698 aa10.1□□□□□ -0.79
C2CD5-202ENST00000396028 CCER1Q8TC90 406 aaPredicted RBP10.09□□□□□ -0.79
C2CD5-202ENST00000396028 MAPKBP1O60336 1514 aa10.09□□□□□ -0.79
C2CD5-202ENST00000396028 KIF27Q86VH2 1401 aa10.09□□□□□ -0.79
C2CD5-202ENST00000396028 NEUROD1Q13562 356 aa10.09□□□□□ -0.79
C2CD5-202ENST00000396028 PABPN1Q86U42 306 aaKnown RBP eCLIP10.09□□□□□ -0.79
C2CD5-202ENST00000396028 KIF21AQ7Z4S6 1674 aa10.08□□□□□ -0.8
C2CD5-202ENST00000396028 ZNF316A6NFI3 1004 aaPredicted RBP10.08□□□□□ -0.8
C2CD5-202ENST00000396028 DIEXFQ68CQ4 756 aaKnown RBP10.08□□□□□ -0.8
C2CD5-202ENST00000396028 AQRO60306 1485 aaKnown RBP eCLIP10.07□□□□□ -0.8
C2CD5-202ENST00000396028 SAMD9Q5K651 1589 aa10.06□□□□□ -0.8
C2CD5-202ENST00000396028 DNMBPQ6XZF7 1577 aa10.06□□□□□ -0.8
C2CD5-202ENST00000396028 DNAJC5BQ9UF47 199 aa10.05□□□□□ -0.8
C2CD5-202ENST00000396028 ABCA5Q8WWZ7 1642 aa10.04□□□□□ -0.8
C2CD5-202ENST00000396028 EFCAB5A4FU69 1503 aa10.04□□□□□ -0.8
C2CD5-202ENST00000396028 ABCA10Q8WWZ4 1543 aa10.04□□□□□ -0.8
C2CD5-202ENST00000396028 IGF1RP08069 1367 aa10.04□□□□□ -0.8
C2CD5-202ENST00000396028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.04□□□□□ -0.8
C2CD5-202ENST00000396028 PCF11O94913 1555 aaKnown RBP10.02□□□□□ -0.81
C2CD5-202ENST00000396028 THOC2Q8NI27 1593 aaKnown RBP10.01□□□□□ -0.81
C2CD5-202ENST00000396028 UBTFP17480 764 aaKnown RBP10.01□□□□□ -0.81
C2CD5-202ENST00000396028 LRRC9Q6ZRR7 1453 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms