RNA–Protein interactions for RNA: ENST00000338447.10

NAA40-201, Transcript of N(alpha)-acetyltransferase 40, NatD catalytic subunit, humanhuman

TSL 1 (best)

Gene NAA40, Length 4,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAA40-201ENST00000338447 NISCHQ9Y2I1 1504 aa21.56■■□□□ 1.04
NAA40-201ENST00000338447 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
NAA40-201ENST00000338447 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
NAA40-201ENST00000338447 ABCC9O60706 1549 aa18.53■□□□□ 0.56
NAA40-201ENST00000338447 CCDC180Q9P1Z9 1646 aa18.38■□□□□ 0.53
NAA40-201ENST00000338447 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
NAA40-201ENST00000338447 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.46
NAA40-201ENST00000338447 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.44
NAA40-201ENST00000338447 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
NAA40-201ENST00000338447 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
NAA40-201ENST00000338447 NACADO15069 1562 aa17.47■□□□□ 0.39
NAA40-201ENST00000338447 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
NAA40-201ENST00000338447 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
NAA40-201ENST00000338447 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
NAA40-201ENST00000338447 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
NAA40-201ENST00000338447 FAM9AQ8IZU1 332 aaPredicted RBP16.96■□□□□ 0.31
NAA40-201ENST00000338447 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
NAA40-201ENST00000338447 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
NAA40-201ENST00000338447 MROH2BQ7Z745 1585 aa16.77■□□□□ 0.28
NAA40-201ENST00000338447 CHIC1Q5VXU3 224 aa16.72■□□□□ 0.27
NAA40-201ENST00000338447 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
NAA40-201ENST00000338447 BICRAQ9NZM4 1560 aa16.63■□□□□ 0.25
NAA40-201ENST00000338447 UNC13AQ9UPW8 1703 aa16.61■□□□□ 0.25
NAA40-201ENST00000338447 BAZ1BQ9UIG0 1483 aaKnown RBP16.6■□□□□ 0.25
NAA40-201ENST00000338447 WIZO95785 1651 aa16.59■□□□□ 0.25
NAA40-201ENST00000338447 RANGAP1P46060 587 aaPredicted RBP16.57■□□□□ 0.24
NAA40-201ENST00000338447 SMARCA4P51532 1647 aa16.52■□□□□ 0.24
NAA40-201ENST00000338447 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.22
NAA40-201ENST00000338447 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
NAA40-201ENST00000338447 EIF4G1Q04637 1599 aaKnown RBP16.44■□□□□ 0.22
NAA40-201ENST00000338447 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
NAA40-201ENST00000338447 UBTFP17480 764 aaKnown RBP16.4■□□□□ 0.22
NAA40-201ENST00000338447 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
NAA40-201ENST00000338447 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
NAA40-201ENST00000338447 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
NAA40-201ENST00000338447 TTBK1Q5TCY1 1321 aaPredicted RBP16.3■□□□□ 0.2
NAA40-201ENST00000338447 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.2
NAA40-201ENST00000338447 NCAPD3P42695 1498 aa16.2■□□□□ 0.18
NAA40-201ENST00000338447 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
NAA40-201ENST00000338447 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
NAA40-201ENST00000338447 PPARGC1BQ86YN6 1023 aaKnown RBP16.13■□□□□ 0.17
NAA40-201ENST00000338447 WRNQ14191 1432 aaPredicted RBP eCLIP16.12■□□□□ 0.17
NAA40-201ENST00000338447 FBLN2P98095 1184 aa16.12■□□□□ 0.17
NAA40-201ENST00000338447 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
NAA40-201ENST00000338447 ERCC6Q03468 1493 aa16.09■□□□□ 0.17
NAA40-201ENST00000338447 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
NAA40-201ENST00000338447 APLP2Q06481 763 aa16.07■□□□□ 0.16
NAA40-201ENST00000338447 NESP48681 1621 aa16.03■□□□□ 0.16
NAA40-201ENST00000338447 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
NAA40-201ENST00000338447 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
NAA40-201ENST00000338447 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
NAA40-201ENST00000338447 PEG3Q9GZU2 1588 aa15.93■□□□□ 0.14
NAA40-201ENST00000338447 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
NAA40-201ENST00000338447 SOGA1O94964 1423 aa15.93■□□□□ 0.14
NAA40-201ENST00000338447 P3H3Q8IVL6 736 aa15.91■□□□□ 0.14
NAA40-201ENST00000338447 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
NAA40-201ENST00000338447 CFTRP13569 1480 aa15.86■□□□□ 0.13
NAA40-201ENST00000338447 TDRD9Q8NDG6 1382 aaKnown RBP15.83■□□□□ 0.12
NAA40-201ENST00000338447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
NAA40-201ENST00000338447 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
NAA40-201ENST00000338447 CUX2O14529 1486 aa15.82■□□□□ 0.12
NAA40-201ENST00000338447 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
NAA40-201ENST00000338447 ARID3CA6NKF2 412 aa15.78■□□□□ 0.12
NAA40-201ENST00000338447 CHMP7Q8WUX9 453 aaPredicted RBP15.77■□□□□ 0.12
NAA40-201ENST00000338447 RUSC2Q8N2Y8 1516 aa15.77■□□□□ 0.12
NAA40-201ENST00000338447 RAD54L2Q9Y4B4 1467 aa15.72■□□□□ 0.11
NAA40-201ENST00000338447 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
NAA40-201ENST00000338447 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
NAA40-201ENST00000338447 EEA1Q15075 1411 aa15.66■□□□□ 0.1
NAA40-201ENST00000338447 ZEB1P37275 1124 aaPredicted RBP15.65■□□□□ 0.1
NAA40-201ENST00000338447 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
NAA40-201ENST00000338447 CUX1P39880 1505 aa15.64■□□□□ 0.09
NAA40-201ENST00000338447 ITGAEP38570 1179 aa15.63■□□□□ 0.09
NAA40-201ENST00000338447 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
NAA40-201ENST00000338447 GOLGA3Q08378 1498 aa15.61■□□□□ 0.09
NAA40-201ENST00000338447 TOPBP1Q92547 1522 aa15.59■□□□□ 0.09
NAA40-201ENST00000338447 AQRO60306 1485 aaKnown RBP eCLIP15.58■□□□□ 0.083e-11■■■■□ 23.9
NAA40-201ENST00000338447 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
NAA40-201ENST00000338447 CLIP1P30622 1438 aa15.55■□□□□ 0.08
NAA40-201ENST00000338447 CEP162Q5TB80 1403 aa15.55■□□□□ 0.08
NAA40-201ENST00000338447 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
NAA40-201ENST00000338447 RAPGEF2Q9Y4G8 1499 aa15.53■□□□□ 0.08
NAA40-201ENST00000338447 TOP2BQ02880 1626 aa15.52■□□□□ 0.08
NAA40-201ENST00000338447 URB2Q14146 1524 aaKnown RBP15.52■□□□□ 0.07
NAA40-201ENST00000338447 TRIM26Q12899 539 aaPredicted RBP15.51■□□□□ 0.07
NAA40-201ENST00000338447 IGF1RP08069 1367 aa15.5■□□□□ 0.07
NAA40-201ENST00000338447 TNIKQ9UKE5 1360 aa15.5■□□□□ 0.07
NAA40-201ENST00000338447 PELP1Q8IZL8 1130 aaKnown RBP15.5■□□□□ 0.07
NAA40-201ENST00000338447 HRCP23327 699 aa15.49■□□□□ 0.07
NAA40-201ENST00000338447 GAPVD1Q14C86 1478 aa15.49■□□□□ 0.07
NAA40-201ENST00000338447 CCER1Q8TC90 406 aaPredicted RBP15.48■□□□□ 0.07
NAA40-201ENST00000338447 DNMBPQ6XZF7 1577 aa15.47■□□□□ 0.07
NAA40-201ENST00000338447 FAM50AQ14320 339 aaKnown RBP15.43■□□□□ 0.06
NAA40-201ENST00000338447 KIF21AQ7Z4S6 1674 aa15.42■□□□□ 0.06
NAA40-201ENST00000338447 CENPBP07199 599 aaPredicted RBP15.39■□□□□ 0.05
NAA40-201ENST00000338447 ZNF608Q9ULD9 1512 aaPredicted RBP15.37■□□□□ 0.05
NAA40-201ENST00000338447 MYT1LQ9UL68 1186 aa15.37■□□□□ 0.05
NAA40-201ENST00000338447 IFT140Q96RY7 1462 aa15.36■□□□□ 0.05
NAA40-201ENST00000338447 ZNF777Q9ULD5 760 aaPredicted RBP15.32■□□□□ 0.04
NAA40-201ENST00000338447 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms