RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
INO80-205ENST00000558357 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
INO80-205ENST00000558357 PELP1Q8IZL8 1130 aaKnown RBP18.24■□□□□ 0.51
INO80-205ENST00000558357 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
INO80-205ENST00000558357 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
INO80-205ENST00000558357 APLP2Q06481 763 aa17.74■□□□□ 0.43
INO80-205ENST00000558357 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
INO80-205ENST00000558357 ERICH6Q7L0X2 663 aa17.46■□□□□ 0.39
INO80-205ENST00000558357 FAM9AQ8IZU1 332 aaPredicted RBP17.44■□□□□ 0.38
INO80-205ENST00000558357 CCER1Q8TC90 406 aaPredicted RBP17.41■□□□□ 0.38
INO80-205ENST00000558357 CENPBP07199 599 aaPredicted RBP17.37■□□□□ 0.37
INO80-205ENST00000558357 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
INO80-205ENST00000558357 TTBK1Q5TCY1 1321 aaPredicted RBP17.27■□□□□ 0.35
INO80-205ENST00000558357 ZEB1P37275 1124 aaPredicted RBP17.24■□□□□ 0.35
INO80-205ENST00000558357 MYT1Q01538 1121 aa17.06■□□□□ 0.32
INO80-205ENST00000558357 NEFLP07196 543 aa17.05■□□□□ 0.32
INO80-205ENST00000558357 RANGAP1P46060 587 aaPredicted RBP17.01■□□□□ 0.31
INO80-205ENST00000558357 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
INO80-205ENST00000558357 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
INO80-205ENST00000558357 YTHDC1Q96MU7 727 aaKnown RBP16.84■□□□□ 0.29
INO80-205ENST00000558357 UBTFP17480 764 aaKnown RBP16.83■□□□□ 0.28
INO80-205ENST00000558357 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
INO80-205ENST00000558357 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.23
INO80-205ENST00000558357 PPARGC1BQ86YN6 1023 aaKnown RBP16.48■□□□□ 0.23
INO80-205ENST00000558357 POLR3GLQ9BT43 218 aa16.42■□□□□ 0.22
INO80-205ENST00000558357 HRCP23327 699 aa16.4■□□□□ 0.22
INO80-205ENST00000558357 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
INO80-205ENST00000558357 ITGAEP38570 1179 aa16.35■□□□□ 0.21
INO80-205ENST00000558357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
INO80-205ENST00000558357 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
INO80-205ENST00000558357 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
INO80-205ENST00000558357 ZNF316A6NFI3 1004 aaPredicted RBP16.25■□□□□ 0.19
INO80-205ENST00000558357 CNGB1Q14028 1251 aaPredicted RBP16.2■□□□□ 0.18
INO80-205ENST00000558357 CLSPNQ9HAW4 1339 aa16.19■□□□□ 0.18
INO80-205ENST00000558357 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
INO80-205ENST00000558357 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
INO80-205ENST00000558357 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
INO80-205ENST00000558357 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
INO80-205ENST00000558357 FAM50AQ14320 339 aaKnown RBP15.91■□□□□ 0.14
INO80-205ENST00000558357 TRIM52Q96A61 297 aa15.89■□□□□ 0.13
INO80-205ENST00000558357 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
INO80-205ENST00000558357 CDK11AQ9UQ88 783 aaPredicted RBP15.87■□□□□ 0.13
INO80-205ENST00000558357 BCANQ96GW7 911 aa15.84■□□□□ 0.13
INO80-205ENST00000558357 ANP32CO43423 234 aa15.84■□□□□ 0.13
INO80-205ENST00000558357 NEUROD1Q13562 356 aa15.82■□□□□ 0.12
INO80-205ENST00000558357 GTF3C3Q9Y5Q9 886 aa15.79■□□□□ 0.12
INO80-205ENST00000558357 CANXP27824 592 aaKnown RBP15.73■□□□□ 0.11
INO80-205ENST00000558357 ZNF326Q5BKZ1 582 aaKnown RBP15.72■□□□□ 0.11
INO80-205ENST00000558357 NEFMP07197 916 aa15.66■□□□□ 0.1
INO80-205ENST00000558357 ANP32AP39687 249 aaKnown RBP15.65■□□□□ 0.1
INO80-205ENST00000558357 SLC24A1O60721 1099 aa15.62■□□□□ 0.09
INO80-205ENST00000558357 BCL11AQ9H165 835 aa15.59■□□□□ 0.09
INO80-205ENST00000558357 ANP32BQ92688 251 aaKnown RBP15.53■□□□□ 0.08
INO80-205ENST00000558357 ACIN1Q9UKV3 1341 aaKnown RBP15.52■□□□□ 0.07
INO80-205ENST00000558357 NPM2Q86SE8 214 aaKnown RBP15.49■□□□□ 0.07
INO80-205ENST00000558357 EIF5BO60841 1220 aaKnown RBP15.43■□□□□ 0.06
INO80-205ENST00000558357 HSP90AA1P07900 732 aaKnown RBP15.43■□□□□ 0.06
INO80-205ENST00000558357 FBLN2P98095 1184 aa15.42■□□□□ 0.06
INO80-205ENST00000558357 UPF2Q9HAU5 1272 aaKnown RBP15.41■□□□□ 0.06
INO80-205ENST00000558357 FKBP8Q14318 412 aa15.36■□□□□ 0.05
INO80-205ENST00000558357 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
INO80-205ENST00000558357 GLIPR1L2Q4G1C9 344 aa15.35■□□□□ 0.05
INO80-205ENST00000558357 ZNF777Q9ULD5 760 aaPredicted RBP15.32■□□□□ 0.04
INO80-205ENST00000558357 P3H3Q8IVL6 736 aa15.31■□□□□ 0.04
INO80-205ENST00000558357 TONSLQ96HA7 1378 aa15.29■□□□□ 0.04
INO80-205ENST00000558357 ARID3CA6NKF2 412 aa15.29■□□□□ 0.04
INO80-205ENST00000558357 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.04
INO80-205ENST00000558357 ABCC9O60706 1549 aa15.28■□□□□ 0.04
INO80-205ENST00000558357 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
INO80-205ENST00000558357 ESF1Q9H501 851 aaKnown RBP15.24■□□□□ 0.03
INO80-205ENST00000558357 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.24■□□□□ 0.03
INO80-205ENST00000558357 FAM9BQ8IZU0 186 aa15.23■□□□□ 0.03
INO80-205ENST00000558357 CCDC136Q96JN2 1154 aa15.21■□□□□ 0.03
INO80-205ENST00000558357 STAG3Q9UJ98 1225 aa15.2■□□□□ 0.02
INO80-205ENST00000558357 CHGAP10645 457 aaKnown RBP15.19■□□□□ 0.02
INO80-205ENST00000558357 DDX10Q13206 875 aaKnown RBP15.18■□□□□ 0.02
INO80-205ENST00000558357 TMC1Q8TDI8 760 aa15.16■□□□□ 0.02
INO80-205ENST00000558357 NBR1Q14596 966 aa15.15■□□□□ 0.02
INO80-205ENST00000558357 SALL2Q9Y467 1007 aaPredicted RBP15.15■□□□□ 0.02
INO80-205ENST00000558357 WDR43Q15061 677 aaKnown RBP eCLIP15.13■□□□□ 0.01
INO80-205ENST00000558357 ARXQ96QS3 562 aa15.1■□□□□ 0.01
INO80-205ENST00000558357 MYH16Q9H6N6 1097 aa15.07■□□□□ 0
INO80-205ENST00000558357 MRS2Q9HD23 443 aa15.07■□□□□ 0
INO80-205ENST00000558357 CDK11BP21127 795 aaKnown RBP15.06■□□□□ 0
INO80-205ENST00000558357 DDRGK1Q96HY6 314 aa15.01□□□□□ -0.01
INO80-205ENST00000558357 NPM1P06748 294 aaKnown RBP eCLIP15.01□□□□□ -0.01
INO80-205ENST00000558357 BECN1Q14457 450 aa15.01□□□□□ -0.01
INO80-205ENST00000558357 ANP32EQ9BTT0 268 aa15.01□□□□□ -0.01
INO80-205ENST00000558357 NCLP19338 710 aaKnown RBP14.99□□□□□ -0.01
INO80-205ENST00000558357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.017e-7■■■□□ 17.2
INO80-205ENST00000558357 CHIC2Q9UKJ5 165 aa14.98□□□□□ -0.01
INO80-205ENST00000558357 DCAF1Q9Y4B6 1507 aa14.98□□□□□ -0.01
INO80-205ENST00000558357 TRIM44Q96DX7 344 aaPredicted RBP14.98□□□□□ -0.01
INO80-205ENST00000558357 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
INO80-205ENST00000558357 GOLGA6L22H0YM25 854 aa14.96□□□□□ -0.01
INO80-205ENST00000558357 TSPY4P0CV99 314 aa14.95□□□□□ -0.02
INO80-205ENST00000558357 TSPY10P0CW01 314 aa14.95□□□□□ -0.02
INO80-205ENST00000558357 KDM2AQ9Y2K7 1162 aa14.95□□□□□ -0.02
INO80-205ENST00000558357 IRX6P78412 446 aaPredicted RBP14.94□□□□□ -0.02
INO80-205ENST00000558357 EIF4G2P78344 907 aaKnown RBP eCLIP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms