RNA–Protein interactions for RNA: ENST00000224756.12

CCSER2-201, Transcript of coiled-coil serine rich protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCSER2, Length 7,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-201ENST00000224756 NISCHQ9Y2I1 1504 aa7.51□□□□□ -1.21
CCSER2-201ENST00000224756 MYO15BQ96JP2 1530 aa6.88□□□□□ -1.31
CCSER2-201ENST00000224756 SHROOM4Q9ULL8 1493 aa6.8□□□□□ -1.32
CCSER2-201ENST00000224756 UTRNP46939 3433 aa6.74□□□□□ -1.33
CCSER2-201ENST00000224756 USP34Q70CQ2 3546 aa6.57□□□□□ -1.36
CCSER2-201ENST00000224756 PPARGC1BQ86YN6 1023 aaKnown RBP6.54□□□□□ -1.36
CCSER2-201ENST00000224756 GOLGB1Q14789 3259 aaKnown RBP6.51□□□□□ -1.37
CCSER2-201ENST00000224756 LOC105371045A0A1W2PR82 267 aa6.43□□□□□ -1.38
CCSER2-201ENST00000224756 SUPT5HO00267 1087 aaKnown RBP6.4□□□□□ -1.38
CCSER2-201ENST00000224756 ZCCHC6Q5VYS8 1495 aaKnown RBP6.4□□□□□ -1.39
CCSER2-201ENST00000224756 PCNTO95613 3336 aa6.37□□□□□ -1.39
CCSER2-201ENST00000224756 SRCAPQ6ZRS2 3230 aa6.36□□□□□ -1.39
CCSER2-201ENST00000224756 CHIC1Q5VXU3 224 aa6.32□□□□□ -1.4
CCSER2-201ENST00000224756 CECR2Q9BXF3 1484 aa6.29□□□□□ -1.4
CCSER2-201ENST00000224756 RB1CC1Q8TDY2 1594 aa6.22□□□□□ -1.41
CCSER2-201ENST00000224756 EHMT2Q96KQ7 1210 aa6.21□□□□□ -1.41
CCSER2-201ENST00000224756 RUSC2Q8N2Y8 1516 aa6.17□□□□□ -1.42
CCSER2-201ENST00000224756 DNAJC5BQ9UF47 199 aa6.16□□□□□ -1.42
CCSER2-201ENST00000224756 CENPFP49454 3210 aa6.15□□□□□ -1.43
CCSER2-201ENST00000224756 EIF4G1Q04637 1599 aaKnown RBP6.15□□□□□ -1.43
CCSER2-201ENST00000224756 MROH2BQ7Z745 1585 aa6.13□□□□□ -1.43
CCSER2-201ENST00000224756 UNC13AQ9UPW8 1703 aa6.13□□□□□ -1.43
CCSER2-201ENST00000224756 DCAF8L2P0C7V8 631 aa6.13□□□□□ -1.43
CCSER2-201ENST00000224756 LAMA3Q16787 3333 aa6.12□□□□□ -1.43
CCSER2-201ENST00000224756 RSF1Q96T23 1441 aaPredicted RBP6.11□□□□□ -1.43
CCSER2-201ENST00000224756 SCRIBQ14160 1630 aa6.11□□□□□ -1.43
CCSER2-201ENST00000224756 WIZO95785 1651 aa6.1□□□□□ -1.43
CCSER2-201ENST00000224756 PCGF6Q9BYE7 350 aa6.07□□□□□ -1.44
CCSER2-201ENST00000224756 BRCA2P51587 3418 aa6.07□□□□□ -1.44
CCSER2-201ENST00000224756 ABCC8Q09428 1581 aa6.05□□□□□ -1.44
CCSER2-201ENST00000224756 ABCC9O60706 1549 aa6.02□□□□□ -1.45
CCSER2-201ENST00000224756 VCANP13611 3396 aa6.02□□□□□ -1.45
CCSER2-201ENST00000224756 CCDC180Q9P1Z9 1646 aa6□□□□□ -1.45
CCSER2-201ENST00000224756 CCDC88BA6NC98 1476 aa6□□□□□ -1.45
CCSER2-201ENST00000224756 FAM9AQ8IZU1 332 aaPredicted RBP6□□□□□ -1.45
CCSER2-201ENST00000224756 SOGA1O94964 1423 aa5.97□□□□□ -1.45
CCSER2-201ENST00000224756 HRCP23327 699 aa5.97□□□□□ -1.45
CCSER2-201ENST00000224756 NACADO15069 1562 aa5.97□□□□□ -1.45
CCSER2-201ENST00000224756 BICRAQ9NZM4 1560 aa5.95□□□□□ -1.46
CCSER2-201ENST00000224756 WDFY3Q8IZQ1 3526 aa5.92□□□□□ -1.46
CCSER2-201ENST00000224756 TTBK1Q5TCY1 1321 aaPredicted RBP5.91□□□□□ -1.46
CCSER2-201ENST00000224756 MYO15AQ9UKN7 3530 aa5.9□□□□□ -1.47
CCSER2-201ENST00000224756 PABPN1Q86U42 306 aaKnown RBP eCLIP5.89□□□□□ -1.47
CCSER2-201ENST00000224756 SCAF1Q9H7N4 1312 aaKnown RBP5.89□□□□□ -1.47
CCSER2-201ENST00000224756 DCAF1Q9Y4B6 1507 aa5.89□□□□□ -1.47
CCSER2-201ENST00000224756 DNAH14Q0VDD8 3507 aa5.85□□□□□ -1.47
CCSER2-201ENST00000224756 LAMA2P24043 3122 aaKnown RBP5.83□□□□□ -1.48
CCSER2-201ENST00000224756 SYNJ1O43426 1573 aa5.83□□□□□ -1.48
CCSER2-201ENST00000224756 XIRP2A4UGR9 3374 aa5.83□□□□□ -1.48
CCSER2-201ENST00000224756 KCNH8Q96L42 1107 aa5.82□□□□□ -1.48
CCSER2-201ENST00000224756 SMARCA2P51531 1590 aa5.82□□□□□ -1.48
CCSER2-201ENST00000224756 CDH23Q9H251 3354 aa5.82□□□□□ -1.48
CCSER2-201ENST00000224756 EYSQ5T1H1 3165 aa5.82□□□□□ -1.48
CCSER2-201ENST00000224756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.81□□□□□ -1.48
CCSER2-201ENST00000224756 UNC80Q8N2C7 3258 aa5.77□□□□□ -1.49
CCSER2-201ENST00000224756 KANK4Q5T7N3 995 aaPredicted RBP5.73□□□□□ -1.49
CCSER2-201ENST00000224756 EP400Q96L91 3159 aa5.73□□□□□ -1.49
CCSER2-201ENST00000224756 NEUROD1Q13562 356 aa5.72□□□□□ -1.49
CCSER2-201ENST00000224756 BAZ1AQ9NRL2 1556 aaPredicted RBP5.71□□□□□ -1.5
CCSER2-201ENST00000224756 DENND4BO75064 1496 aaPredicted RBP5.7□□□□□ -1.5
CCSER2-201ENST00000224756 SMARCA4P51532 1647 aa5.7□□□□□ -1.5
CCSER2-201ENST00000224756 SZT2Q5T011 3432 aa5.7□□□□□ -1.5
CCSER2-201ENST00000224756 RAPGEF2Q9Y4G8 1499 aa5.7□□□□□ -1.5
CCSER2-201ENST00000224756 SPEGQ15772 3267 aa5.69□□□□□ -1.5
CCSER2-201ENST00000224756 ZFHX3Q15911 3703 aa5.68□□□□□ -1.5
CCSER2-201ENST00000224756 LRRIQ1Q96JM4 1722 aa5.66□□□□□ -1.5
CCSER2-201ENST00000224756 ARAP1Q96P48 1450 aa5.64□□□□□ -1.51
CCSER2-201ENST00000224756 NESP48681 1621 aa5.64□□□□□ -1.51
CCSER2-201ENST00000224756 MKI67P46013 3256 aaKnown RBP5.63□□□□□ -1.51
CCSER2-201ENST00000224756 KDM5BQ9UGL1 1544 aa5.63□□□□□ -1.51
CCSER2-201ENST00000224756 AQRO60306 1485 aaKnown RBP eCLIP5.63□□□□□ -1.51
CCSER2-201ENST00000224756 RANGAP1P46060 587 aaPredicted RBP5.63□□□□□ -1.51
CCSER2-201ENST00000224756 CUX1P39880 1505 aa5.62□□□□□ -1.51
CCSER2-201ENST00000224756 SPTBN5Q9NRC6 3674 aaKnown RBP5.62□□□□□ -1.51
CCSER2-201ENST00000224756 KDM6BO15054 1643 aa5.61□□□□□ -1.51
CCSER2-201ENST00000224756 PTPRKQ15262 1439 aa5.61□□□□□ -1.51
CCSER2-201ENST00000224756 TRIM41Q8WV44 630 aa5.61□□□□□ -1.51
CCSER2-201ENST00000224756 TOP2AP11388 1531 aaKnown RBP5.61□□□□□ -1.51
CCSER2-201ENST00000224756 CEP162Q5TB80 1403 aa5.6□□□□□ -1.51
CCSER2-201ENST00000224756 DMDP11532 3685 aa5.6□□□□□ -1.51
CCSER2-201ENST00000224756 HIRIP3Q9BW71 556 aaPredicted RBP5.59□□□□□ -1.52
CCSER2-201ENST00000224756 ATAD2BQ9ULI0 1458 aa5.58□□□□□ -1.52
CCSER2-201ENST00000224756 KIF21BO75037 1637 aa5.58□□□□□ -1.52
CCSER2-201ENST00000224756 MAGI3Q5TCQ9 1506 aa5.58□□□□□ -1.52
CCSER2-201ENST00000224756 MAPKBP1O60336 1514 aa5.57□□□□□ -1.52
CCSER2-201ENST00000224756 MIER1Q8N108 512 aa5.56□□□□□ -1.52
CCSER2-201ENST00000224756 RANBP2P49792 3224 aaKnown RBP5.56□□□□□ -1.52
CCSER2-201ENST00000224756 SENP3-EIF4A1A0A087X0R7 540 aa5.56□□□□□ -1.52
CCSER2-201ENST00000224756 CLIP1P30622 1438 aa5.55□□□□□ -1.52
CCSER2-201ENST00000224756 MUC3AQ02505 3323 aa5.55□□□□□ -1.52
CCSER2-201ENST00000224756 CCDC184Q52MB2 194 aa5.55□□□□□ -1.52
CCSER2-201ENST00000224756 CEP350Q5VT06 3117 aa5.55□□□□□ -1.52
CCSER2-201ENST00000224756 TRIM26Q12899 539 aaPredicted RBP5.55□□□□□ -1.52
CCSER2-201ENST00000224756 PEG3Q9GZU2 1588 aa5.52□□□□□ -1.53
CCSER2-201ENST00000224756 RAD54L2Q9Y4B4 1467 aa5.52□□□□□ -1.53
CCSER2-201ENST00000224756 REV3LO60673 3130 aa5.5□□□□□ -1.53
CCSER2-201ENST00000224756 ARHGAP35Q9NRY4 1499 aa5.49□□□□□ -1.53
CCSER2-201ENST00000224756 C11orf95C9JLR9 678 aaPredicted RBP5.49□□□□□ -1.53
CCSER2-201ENST00000224756 PHLDB1Q86UU1 1377 aa5.49□□□□□ -1.53
CCSER2-201ENST00000224756 PRXQ9BXM0 1461 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms