Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.05■□□□□ 0.32
UPK1BO75841 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.05■□□□□ 0.32
UPK1BO75841 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
UPK1BO75841 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.05■□□□□ 0.32
UPK1BO75841 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.05■□□□□ 0.32
UPK1BO75841 SMUG1P1-201ENST00000590640 811 ntBASIC17.05■□□□□ 0.32
UPK1BO75841 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.05■□□□□ 0.32
UPK1BO75841 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
UPK1BO75841 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UPK1BO75841 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.05■□□□□ 0.32
UPK1BO75841 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UPK1BO75841 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UPK1BO75841 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 AIRN-201ENST00000601203 4374 ntBASIC17.05■□□□□ 0.32
UPK1BO75841 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.05■□□□□ 0.32
UPK1BO75841 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
UPK1BO75841 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 AL512353.2-201ENST00000448759 1962 ntBASIC17.04■□□□□ 0.32
UPK1BO75841 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK1BO75841 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
UPK1BO75841 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UPK1BO75841 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK1BO75841 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UPK1BO75841 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
UPK1BO75841 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UPK1BO75841 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UPK1BO75841 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK1BO75841 HTR7P1-202ENST00000624664 4411 ntBASIC17.04■□□□□ 0.32
UPK1BO75841 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK1BO75841 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.04■□□□□ 0.32
UPK1BO75841 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
UPK1BO75841 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK1BO75841 LINC00896-202ENST00000609602 2128 ntBASIC17.04■□□□□ 0.32
UPK1BO75841 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 AC141586.3-201ENST00000562166 1838 ntBASIC17.04■□□□□ 0.32
UPK1BO75841 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.04■□□□□ 0.32
UPK1BO75841 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.04■□□□□ 0.32
UPK1BO75841 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 AL139384.1-201ENST00000612143 3047 ntBASIC17.04■□□□□ 0.32
UPK1BO75841 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
UPK1BO75841 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.04■□□□□ 0.32
UPK1BO75841 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1BO75841 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UPK1BO75841 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.03■□□□□ 0.32
UPK1BO75841 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.03■□□□□ 0.32
UPK1BO75841 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
UPK1BO75841 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.03■□□□□ 0.32
UPK1BO75841 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
UPK1BO75841 AC084018.2-201ENST00000613093 2607 ntBASIC17.03■□□□□ 0.32
UPK1BO75841 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UPK1BO75841 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms