Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF253O75346 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF253O75346 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF253O75346 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF253O75346 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF253O75346 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF253O75346 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 AC009237.14-201ENST00000609975 1594 ntBASIC15.19■□□□□ 0.02
ZNF253O75346 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF253O75346 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
ZNF253O75346 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
ZNF253O75346 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF253O75346 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF253O75346 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.19■□□□□ 0.02
ZNF253O75346 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF253O75346 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF253O75346 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF253O75346 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
ZNF253O75346 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF253O75346 CYP21A1P-202ENST00000354927 1481 ntBASIC15.19■□□□□ 0.02
ZNF253O75346 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF253O75346 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF253O75346 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
ZNF253O75346 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF253O75346 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF253O75346 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ZNF253O75346 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
ZNF253O75346 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF253O75346 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF253O75346 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
ZNF253O75346 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF253O75346 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ZNF253O75346 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 UBE2DNL-204ENST00000602536 740 ntBASIC15.18■□□□□ 0.02
ZNF253O75346 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF253O75346 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ZNF253O75346 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF253O75346 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
ZNF253O75346 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ZNF253O75346 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
ZNF253O75346 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF253O75346 TREX1-205ENST00000625293 1783 ntBASIC15.17■□□□□ 0.02
ZNF253O75346 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ZNF253O75346 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ZNF253O75346 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
ZNF253O75346 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.17■□□□□ 0.02
ZNF253O75346 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF253O75346 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.17■□□□□ 0.02
ZNF253O75346 AC007322.4-201ENST00000509611 723 ntBASIC15.17■□□□□ 0.02
ZNF253O75346 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.17■□□□□ 0.02
ZNF253O75346 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.17■□□□□ 0.02
ZNF253O75346 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.17■□□□□ 0.02
ZNF253O75346 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF253O75346 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF253O75346 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms