Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.53■□□□□ 0.4
PFDN1O60925 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.53■□□□□ 0.4
PFDN1O60925 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.53■□□□□ 0.4
PFDN1O60925 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PFDN1O60925 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PFDN1O60925 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PFDN1O60925 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.52■□□□□ 0.4
PFDN1O60925 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.52■□□□□ 0.4
PFDN1O60925 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.52■□□□□ 0.4
PFDN1O60925 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.52■□□□□ 0.4
PFDN1O60925 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.52■□□□□ 0.4
PFDN1O60925 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PFDN1O60925 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.52■□□□□ 0.4
PFDN1O60925 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PFDN1O60925 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PFDN1O60925 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PFDN1O60925 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.52■□□□□ 0.4
PFDN1O60925 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PFDN1O60925 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PFDN1O60925 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.52■□□□□ 0.39
PFDN1O60925 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PFDN1O60925 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PFDN1O60925 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PFDN1O60925 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PFDN1O60925 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PFDN1O60925 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PFDN1O60925 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.51■□□□□ 0.39
PFDN1O60925 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PFDN1O60925 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PFDN1O60925 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PFDN1O60925 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.5■□□□□ 0.39
PFDN1O60925 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.5■□□□□ 0.39
PFDN1O60925 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.5■□□□□ 0.39
PFDN1O60925 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.5■□□□□ 0.39
PFDN1O60925 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.5■□□□□ 0.39
PFDN1O60925 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PFDN1O60925 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.5■□□□□ 0.39
PFDN1O60925 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.5■□□□□ 0.39
PFDN1O60925 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.5■□□□□ 0.39
PFDN1O60925 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PFDN1O60925 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN1O60925 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.49■□□□□ 0.39
PFDN1O60925 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PFDN1O60925 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN1O60925 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN1O60925 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN1O60925 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.49■□□□□ 0.39
PFDN1O60925 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.49■□□□□ 0.39
PFDN1O60925 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.49■□□□□ 0.39
PFDN1O60925 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.49■□□□□ 0.39
PFDN1O60925 AC004687.1-201ENST00000579003 1625 ntBASIC17.49■□□□□ 0.39
PFDN1O60925 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PFDN1O60925 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms