Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GMDSO60547 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GMDSO60547 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GMDSO60547 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.26■□□□□ 0.35
GMDSO60547 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GMDSO60547 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.26■□□□□ 0.35
GMDSO60547 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GMDSO60547 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GMDSO60547 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GMDSO60547 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GMDSO60547 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GMDSO60547 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
GMDSO60547 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GMDSO60547 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GMDSO60547 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GMDSO60547 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GMDSO60547 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GMDSO60547 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GMDSO60547 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.25■□□□□ 0.35
GMDSO60547 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GMDSO60547 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
GMDSO60547 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GMDSO60547 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GMDSO60547 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.25■□□□□ 0.35
GMDSO60547 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.25■□□□□ 0.35
GMDSO60547 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.25■□□□□ 0.35
GMDSO60547 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.25■□□□□ 0.35
GMDSO60547 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.25■□□□□ 0.35
GMDSO60547 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GMDSO60547 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
GMDSO60547 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
GMDSO60547 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GMDSO60547 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GMDSO60547 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.25■□□□□ 0.35
GMDSO60547 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GMDSO60547 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.25■□□□□ 0.35
GMDSO60547 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.25■□□□□ 0.35
GMDSO60547 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GMDSO60547 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GMDSO60547 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.25■□□□□ 0.35
GMDSO60547 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GMDSO60547 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
GMDSO60547 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.25■□□□□ 0.35
GMDSO60547 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GMDSO60547 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.25■□□□□ 0.35
GMDSO60547 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GMDSO60547 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.24■□□□□ 0.35
GMDSO60547 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GMDSO60547 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GMDSO60547 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.24■□□□□ 0.35
GMDSO60547 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GMDSO60547 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GMDSO60547 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
GMDSO60547 BX276092.2-201ENST00000417668 665 ntBASIC17.24■□□□□ 0.35
GMDSO60547 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.24■□□□□ 0.35
GMDSO60547 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.24■□□□□ 0.35
GMDSO60547 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GMDSO60547 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.24■□□□□ 0.35
GMDSO60547 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GMDSO60547 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GMDSO60547 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.24■□□□□ 0.35
GMDSO60547 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.24■□□□□ 0.35
GMDSO60547 AC007613.1-201ENST00000572811 2597 ntBASIC17.24■□□□□ 0.35
GMDSO60547 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.24■□□□□ 0.35
GMDSO60547 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.23■□□□□ 0.35
GMDSO60547 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GMDSO60547 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GMDSO60547 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.23■□□□□ 0.35
GMDSO60547 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.23■□□□□ 0.35
GMDSO60547 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.23■□□□□ 0.35
GMDSO60547 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GMDSO60547 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GMDSO60547 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GMDSO60547 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.23■□□□□ 0.35
GMDSO60547 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.23■□□□□ 0.35
GMDSO60547 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GMDSO60547 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
GMDSO60547 AC090192.1-201ENST00000517740 490 ntBASIC17.23■□□□□ 0.35
GMDSO60547 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
GMDSO60547 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.23■□□□□ 0.35
GMDSO60547 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.23■□□□□ 0.35
GMDSO60547 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.23■□□□□ 0.35
GMDSO60547 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.23■□□□□ 0.35
GMDSO60547 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GMDSO60547 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GMDSO60547 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.23■□□□□ 0.35
GMDSO60547 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GMDSO60547 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
GMDSO60547 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GMDSO60547 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GMDSO60547 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GMDSO60547 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 KRT17P1-201ENST00000399211 1546 ntBASIC17.22■□□□□ 0.35
GMDSO60547 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms