Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 AC068880.1-201ENST00000507289 2297 ntBASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TCRBV3S1A0A5B6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCRBV3S1A0A5B6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 AL512353.2-201ENST00000448759 1962 ntBASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 AC096631.2-201ENST00000436136 790 ntBASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 AL031432.3-201ENST00000607698 485 ntBASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCRBV3S1A0A5B6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCRBV3S1A0A5B6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms