Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC135050.7-201ENST00000624508 2218 ntBASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 AL390961.4-201ENST00000623958 2535 ntBASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 AL355472.2-201ENST00000422958 438 ntBASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 AL589743.5-201ENST00000616611 1050 ntBASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-7A0A0A0MS04 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 C2orf69P4-201ENST00000565394 541 ntBASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC231657.2-201ENST00000624556 255 ntBASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV6-7A0A0A0MS04 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 OR10C1-204ENST00000622521 1039 ntBASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms