Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3-BMI1R4GMX3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 MKRN4P-201ENST00000444706 1521 ntBASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 AC090164.3-201ENST00000610780 2143 ntBASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 TNRC18P3-201ENST00000441896 2691 ntBASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3-BMI1R4GMX3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 BICD1-207ENST00000551848 1962 ntBASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 AC105265.2-201ENST00000467189 838 ntBASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 AC008175.2-201ENST00000612840 297 ntBASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 AC141586.5-201ENST00000624546 2050 ntBASIC18.34■□□□□ 0.53
COMMD3-BMI1R4GMX3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
COMMD3-BMI1R4GMX3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.33■□□□□ 0.53
COMMD3-BMI1R4GMX3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
COMMD3-BMI1R4GMX3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD3-BMI1R4GMX3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD3-BMI1R4GMX3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD3-BMI1R4GMX3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD3-BMI1R4GMX3 POU5F1P4-201ENST00000413175 1085 ntBASIC18.33■□□□□ 0.52
COMMD3-BMI1R4GMX3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.33■□□□□ 0.52
COMMD3-BMI1R4GMX3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD3-BMI1R4GMX3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.33■□□□□ 0.52
COMMD3-BMI1R4GMX3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD3-BMI1R4GMX3 AC009053.2-201ENST00000563701 2365 ntBASIC18.33■□□□□ 0.52
COMMD3-BMI1R4GMX3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD3-BMI1R4GMX3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 IRS3P-201ENST00000223076 1006 ntBASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 AC027612.3-201ENST00000413684 1047 ntBASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 AC005837.3-201ENST00000612163 286 ntBASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3-BMI1R4GMX3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms