Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 AC239809.2-201ENST00000415381 517 ntBASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 Z99916.2-201ENST00000604037 246 ntBASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 AC073912.3-201ENST00000624414 853 ntBASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.78■□□□□ 0.76
NCKIPSDQ9NZQ3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.77■□□□□ 0.76
NCKIPSDQ9NZQ3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
NCKIPSDQ9NZQ3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.77■□□□□ 0.75
NCKIPSDQ9NZQ3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NCKIPSDQ9NZQ3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NCKIPSDQ9NZQ3 KRT17P2-201ENST00000300992 1314 ntBASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 TMEM179-206ENST00000616017 1645 ntBASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 AL691432.2-201ENST00000607222 2038 ntBASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms