Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.67■■□□□ 1.06
PDLIM2Q96JY6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PDLIM2Q96JY6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM2Q96JY6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM2Q96JY6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.67■■□□□ 1.06
PDLIM2Q96JY6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 AC126544.1-201ENST00000580842 1059 ntBASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 AC120498.10-201ENST00000621827 505 ntBASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM2Q96JY6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 AL356652.1-201ENST00000615962 565 ntBASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 AC009053.2-201ENST00000563701 2365 ntBASIC21.65■■□□□ 1.06
PDLIM2Q96JY6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDLIM2Q96JY6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PDLIM2Q96JY6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.64■■□□□ 1.06
PDLIM2Q96JY6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDLIM2Q96JY6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 AC012313.1-201ENST00000593393 3059 ntBASIC21.64■■□□□ 1.05
PDLIM2Q96JY6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 ESPNP-201ENST00000270691 2015 ntBASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 TPRG1LP1-201ENST00000598702 760 ntBASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 MIR4466-201ENST00000606121 54 ntBASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 AC243732.1-201ENST00000612648 864 ntBASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.63■■□□□ 1.05
PDLIM2Q96JY6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 AC010141.2-201ENST00000452426 721 ntBASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 KRT87P-202ENST00000534226 1464 ntBASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM2Q96JY6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms