Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTP4Q96DX8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTP4Q96DX8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTP4Q96DX8 AC092368.3-202ENST00000574180 1591 ntBASIC19.97■□□□□ 0.79
RTP4Q96DX8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RTP4Q96DX8 POU5F1P3-201ENST00000428824 1078 ntBASIC19.97■□□□□ 0.79
RTP4Q96DX8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTP4Q96DX8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.97■□□□□ 0.79
RTP4Q96DX8 AC060766.5-201ENST00000590539 871 ntBASIC19.97■□□□□ 0.79
RTP4Q96DX8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTP4Q96DX8 AC083880.1-201ENST00000608266 535 ntBASIC19.97■□□□□ 0.79
RTP4Q96DX8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTP4Q96DX8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTP4Q96DX8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RTP4Q96DX8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.97■□□□□ 0.79
RTP4Q96DX8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RTP4Q96DX8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTP4Q96DX8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTP4Q96DX8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTP4Q96DX8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTP4Q96DX8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RTP4Q96DX8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.96■□□□□ 0.79
RTP4Q96DX8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTP4Q96DX8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTP4Q96DX8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTP4Q96DX8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTP4Q96DX8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.96■□□□□ 0.79
RTP4Q96DX8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.96■□□□□ 0.79
RTP4Q96DX8 PNMA6B-201ENST00000538162 1200 ntBASIC19.96■□□□□ 0.79
RTP4Q96DX8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.96■□□□□ 0.79
RTP4Q96DX8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RTP4Q96DX8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RTP4Q96DX8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.96■□□□□ 0.79
RTP4Q96DX8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.96■□□□□ 0.79
RTP4Q96DX8 ZNF815P-204ENST00000434898 1737 ntBASIC19.96■□□□□ 0.79
RTP4Q96DX8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTP4Q96DX8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.95■□□□□ 0.78
RTP4Q96DX8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.95■□□□□ 0.78
RTP4Q96DX8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.95■□□□□ 0.78
RTP4Q96DX8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.95■□□□□ 0.78
RTP4Q96DX8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.95■□□□□ 0.78
RTP4Q96DX8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTP4Q96DX8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.95■□□□□ 0.78
RTP4Q96DX8 AL121906.2-201ENST00000621597 723 ntBASIC19.95■□□□□ 0.78
RTP4Q96DX8 LINC01465-201ENST00000408887 1940 ntBASIC19.95■□□□□ 0.78
RTP4Q96DX8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RTP4Q96DX8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.95■□□□□ 0.78
RTP4Q96DX8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTP4Q96DX8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.94■□□□□ 0.78
RTP4Q96DX8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTP4Q96DX8 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.94■□□□□ 0.78
RTP4Q96DX8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTP4Q96DX8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RTP4Q96DX8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTP4Q96DX8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.94■□□□□ 0.78
RTP4Q96DX8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTP4Q96DX8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
RTP4Q96DX8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.94■□□□□ 0.78
RTP4Q96DX8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.94■□□□□ 0.78
RTP4Q96DX8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTP4Q96DX8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTP4Q96DX8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTP4Q96DX8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.94■□□□□ 0.78
RTP4Q96DX8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
RTP4Q96DX8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RTP4Q96DX8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTP4Q96DX8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.93■□□□□ 0.78
RTP4Q96DX8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTP4Q96DX8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTP4Q96DX8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTP4Q96DX8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
RTP4Q96DX8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTP4Q96DX8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTP4Q96DX8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTP4Q96DX8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTP4Q96DX8 YBX1P10-201ENST00000444752 975 ntBASIC19.93■□□□□ 0.78
RTP4Q96DX8 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.93■□□□□ 0.78
RTP4Q96DX8 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.93■□□□□ 0.78
RTP4Q96DX8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.93■□□□□ 0.78
RTP4Q96DX8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.93■□□□□ 0.78
RTP4Q96DX8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.93■□□□□ 0.78
RTP4Q96DX8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTP4Q96DX8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.93■□□□□ 0.78
RTP4Q96DX8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms