Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.05■□□□□ 0.8
GRAMD1AQ96CP6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1AQ96CP6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1AQ96CP6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GRAMD1AQ96CP6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1AQ96CP6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 TREX1-205ENST00000625293 1783 ntBASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1AQ96CP6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 HLA-B-256ENST00000639848 1089 ntBASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
GRAMD1AQ96CP6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 LETM1P2-201ENST00000597330 2178 ntBASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 AC060766.5-201ENST00000590539 871 ntBASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 AC073648.6-201ENST00000641589 218 ntBASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GRAMD1AQ96CP6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
GRAMD1AQ96CP6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GRAMD1AQ96CP6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.02■□□□□ 0.79
GRAMD1AQ96CP6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
GRAMD1AQ96CP6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GRAMD1AQ96CP6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
GRAMD1AQ96CP6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 UNC93B4-201ENST00000505679 747 ntBASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
GRAMD1AQ96CP6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GRAMD1AQ96CP6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GRAMD1AQ96CP6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
GRAMD1AQ96CP6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GRAMD1AQ96CP6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GRAMD1AQ96CP6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20■□□□□ 0.79
GRAMD1AQ96CP6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms