Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS1Q8NFJ9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 AC087623.3-201ENST00000607047 1098 ntBASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BBS1Q8NFJ9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BBS1Q8NFJ9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BBS1Q8NFJ9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BBS1Q8NFJ9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BBS1Q8NFJ9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
BBS1Q8NFJ9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS1Q8NFJ9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 C2orf69P4-201ENST00000565394 541 ntBASIC17.57■□□□□ 0.4
BBS1Q8NFJ9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms