Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RP1L1Q8IWN7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 TSPY5P-201ENST00000426936 936 ntBASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 AP006587.1-201ENST00000534129 1502 ntBASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 AC130371.2-201ENST00000619443 611 ntBASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RP1L1Q8IWN7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RP1L1Q8IWN7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
RP1L1Q8IWN7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RP1L1Q8IWN7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RP1L1Q8IWN7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RP1L1Q8IWN7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
RP1L1Q8IWN7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RP1L1Q8IWN7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 AC005229.4-201ENST00000610085 2198 ntBASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 INGX-201ENST00000359239 846 ntBASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 AL138966.2-201ENST00000621997 464 ntBASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms