Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 AC097493.4-201ENST00000641197 219 ntBASIC17.69■□□□□ 0.42
RTL6Q6ICC9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL6Q6ICC9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 AP002982.1-201ENST00000492365 877 ntBASIC17.68■□□□□ 0.42
RTL6Q6ICC9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL6Q6ICC9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 KRT18P21-201ENST00000515767 1272 ntBASIC17.67■□□□□ 0.42
RTL6Q6ICC9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL6Q6ICC9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 NUDT16P1-203ENST00000513809 620 ntBASIC17.66■□□□□ 0.42
RTL6Q6ICC9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL6Q6ICC9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL6Q6ICC9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms