Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.371e-7■■□□□ 13.2
SRSF1Q07955 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.27■□□□□ 0.361e-7■■□□□ 13.2
SRSF1Q07955 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.87■□□□□ 0.291e-7■■□□□ 13.2
SRSF1Q07955 PKMYT1-220ENST00000576268 1091 ntTSL 316.82■□□□□ 0.281e-7■■□□□ 13.2
SRSF1Q07955 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.281e-7■■□□□ 13.2
SRSF1Q07955 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.79■□□□□ 0.121e-7■■□□□ 13.2
SRSF1Q07955 PKMYT1-202ENST00000382240 1991 ntTSL 215.73■□□□□ 0.111e-7■■□□□ 13.2
SRSF1Q07955 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.116e-11■■□□□ 13.2
SRSF1Q07955 DNMT3A-215ENST00000496570 656 ntTSL 315.03■□□□□ -01e-7■■□□□ 13.2
SRSF1Q07955 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.91□□□□□ -0.021e-7■■□□□ 13.2
SRSF1Q07955 GNL1-205ENST00000487166 522 ntTSL 314.77□□□□□ -0.051e-7■■□□□ 13.2
SRSF1Q07955 DNMT3A-209ENST00000470983 589 ntTSL 314.43□□□□□ -0.11e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.54□□□□□ -0.241e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-214ENST00000612203 466 ntTSL 412.98□□□□□ -0.331e-7■■□□□ 13.2
SRSF1Q07955 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.481e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-222ENST00000618186 402 ntTSL 511.83□□□□□ -0.521e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-217ENST00000613892 455 ntTSL 511.7□□□□□ -0.541e-7■■□□□ 13.2
SRSF1Q07955 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.661e-7■■□□□ 13.2
SRSF1Q07955 CIC-204ENST00000572681 8218 ntTSL 5 BASIC10.82□□□□□ -0.681e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-220ENST00000616796 712 ntTSL 510.24□□□□□ -0.771e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-205ENST00000429408 634 ntTSL 3 BASIC10.07□□□□□ -0.81e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-226ENST00000629211 428 ntTSL 59.47□□□□□ -0.891e-7■■□□□ 13.2
SRSF1Q07955 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.051e-7■■□□□ 13.2
SRSF1Q07955 GNL1-203ENST00000462708 774 ntTSL 28.32□□□□□ -1.081e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-219ENST00000616192 287 ntTSL 36.68□□□□□ -1.341e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.97□□□□□ -1.451e-7■■□□□ 13.2
SRSF1Q07955 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.36□□□□□ -1.556e-11■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-215ENST00000612949 832 ntTSL 55.21□□□□□ -1.581e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.39□□□□□ -1.711e-7■■□□□ 13.2
SRSF1Q07955 GSDMB-206ENST00000464556 710 ntTSL 314.79□□□□□ -0.044e-7■■□□□ 13.2
SRSF1Q07955 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.634e-7■■□□□ 13.2
SRSF1Q07955 GSDMB-205ENST00000418519 1597 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.84e-7■■□□□ 13.2
SRSF1Q07955 GSDMB-212ENST00000520542 1546 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.844e-7■■□□□ 13.2
SRSF1Q07955 GSDMB-203ENST00000394175 1626 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.914e-7■■□□□ 13.2
SRSF1Q07955 GSDMB-204ENST00000394179 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.994e-7■■□□□ 13.2
SRSF1Q07955 GSDMB-215ENST00000524039 1100 ntTSL 28.39□□□□□ -1.074e-7■■□□□ 13.2
SRSF1Q07955 GSDMB-208ENST00000477054 4655 ntTSL 57.76□□□□□ -1.174e-7■■□□□ 13.2
SRSF1Q07955 GSDMB-213ENST00000522564 958 ntTSL 27.61□□□□□ -1.194e-7■■□□□ 13.2
SRSF1Q07955 GSDMB-214ENST00000523371 1127 ntTSL 26.29□□□□□ -1.44e-7■■□□□ 13.2
SRSF1Q07955 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.414e-7■■□□□ 13.2
SRSF1Q07955 RBM3-210ENST00000491236 729 ntTSL 217.82■□□□□ 0.444e-7■■□□□ 13.2
SRSF1Q07955 RBM3-206ENST00000485213 947 ntTSL 217.58■□□□□ 0.44e-7■■□□□ 13.2
SRSF1Q07955 RBM3-207ENST00000488216 835 ntTSL 316.27■□□□□ 0.24e-7■■□□□ 13.2
SRSF1Q07955 RBM3-211ENST00000491240 951 ntTSL 1 (best)15.76■□□□□ 0.114e-7■■□□□ 13.2
SRSF1Q07955 RBM3-204ENST00000466764 1375 ntTSL 315.28■□□□□ 0.044e-7■■□□□ 13.2
SRSF1Q07955 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.014e-7■■□□□ 13.2
SRSF1Q07955 RBM3-208ENST00000489344 724 ntTSL 214.35□□□□□ -0.114e-7■■□□□ 13.2
SRSF1Q07955 RBM3-205ENST00000472897 501 ntTSL 514.17□□□□□ -0.144e-7■■□□□ 13.2
SRSF1Q07955 RBM3-209ENST00000490127 567 ntTSL 511.16□□□□□ -0.624e-7■■□□□ 13.2
SRSF1Q07955 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.84e-7■■□□□ 13.2
SRSF1Q07955 SUN1-213ENST00000433212 3474 ntTSL 59.04□□□□□ -0.961e-6■■□□□ 13.2
SRSF1Q07955 C9orf3-212ENST00000468164 849 ntTSL 512.85□□□□□ -0.351e-6■■□□□ 13.2
SRSF1Q07955 C9orf3-221ENST00000489562 646 ntTSL 212.11□□□□□ -0.471e-6■■□□□ 13.2
SRSF1Q07955 C20orf204-201ENST00000358393 1466 ntTSL 223.06■■□□□ 1.282e-11■■□□□ 13.1
SRSF1Q07955 C20orf204-204ENST00000463337 1412 ntAPPRIS ALT2 TSL 1 (best)20.25■□□□□ 0.832e-11■■□□□ 13.1
SRSF1Q07955 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.62e-10■■□□□ 13.1
SRSF1Q07955 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.632e-10■■□□□ 13.1
SRSF1Q07955 SUGP2-201ENST00000330854 3629 ntTSL 1 (best)8.56□□□□□ -1.042e-10■■□□□ 13.1
SRSF1Q07955 SUGP2-206ENST00000594773 4169 ntTSL 27.58□□□□□ -1.22e-10■■□□□ 13.1
SRSF1Q07955 GATC-201ENST00000229384 372 ntTSL 214.32□□□□□ -0.126e-7■■□□□ 13.1
SRSF1Q07955 WDR74-217ENST00000545112 788 ntTSL 218.76■□□□□ 0.591e-12■■□□□ 13.1
SRSF1Q07955 WDR74-212ENST00000541930 827 ntTSL 517.82■□□□□ 0.441e-12■■□□□ 13.1
SRSF1Q07955 WDR74-211ENST00000540620 984 ntTSL 316.17■□□□□ 0.181e-12■■□□□ 13.1
SRSF1Q07955 WDR74-209ENST00000538150 487 ntTSL 38.77□□□□□ -1.011e-12■■□□□ 13.1
SRSF1Q07955 SQSTM1-215ENST00000514093 842 ntTSL 520.8■□□□□ 0.921e-6■■□□□ 13.1
SRSF1Q07955 SQSTM1-209ENST00000504627 602 ntTSL 517.09■□□□□ 0.331e-6■■□□□ 13.1
SRSF1Q07955 SQSTM1-204ENST00000453046 572 ntTSL 417.09■□□□□ 0.331e-6■■□□□ 13.1
SRSF1Q07955 SQSTM1-212ENST00000508284 578 ntTSL 417.09■□□□□ 0.331e-6■■□□□ 13.1
SRSF1Q07955 SQSTM1-205ENST00000464493 532 ntTSL 413.2□□□□□ -0.31e-6■■□□□ 13.1
SRSF1Q07955 SQSTM1-207ENST00000481335 562 ntTSL 411.64□□□□□ -0.551e-6■■□□□ 13.1
SRSF1Q07955 SQSTM1-203ENST00000422245 628 ntTSL 411.15□□□□□ -0.621e-6■■□□□ 13.1
SRSF1Q07955 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.051e-7■■□□□ 13.1
SRSF1Q07955 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.511e-7■■□□□ 13.1
SRSF1Q07955 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.651e-7■■□□□ 13.1
SRSF1Q07955 SLC26A6-218ENST00000482282 1029 ntTSL 513.77□□□□□ -0.213e-8■■□□□ 13.1
SRSF1Q07955 SLC26A6-220ENST00000489483 5682 ntTSL 212.04□□□□□ -0.483e-8■■□□□ 13.1
SRSF1Q07955 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC9.87□□□□□ -0.833e-8■■□□□ 13.1
SRSF1Q07955 SLC26A6-217ENST00000480524 2727 ntTSL 1 (best)9.63□□□□□ -0.873e-8■■□□□ 13.1
SRSF1Q07955 USP6NL-204ENST00000606752 1823 ntTSL 1 (best)17.78■□□□□ 0.447e-7■■□□□ 13.1
SRSF1Q07955 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.657e-7■■□□□ 13.1
SRSF1Q07955 RBM14-206ENST00000460762 459 ntTSL 219.26■□□□□ 0.671e-10■■□□□ 13.1
SRSF1Q07955 CCDC9-205ENST00000600117 580 ntTSL 218.08■□□□□ 0.483e-7■■□□□ 13.1
SRSF1Q07955 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.313e-7■■□□□ 13.1
SRSF1Q07955 GRIPAP1-210ENST00000617369 531 ntTSL 315.75■□□□□ 0.113e-7■■□□□ 13.1
SRSF1Q07955 GRIPAP1-213ENST00000621664 471 ntTSL 215.52■□□□□ 0.083e-7■■□□□ 13.1
SRSF1Q07955 SLC6A8-210ENST00000485324 2401 ntTSL 215.28■□□□□ 0.041e-10■■□□□ 13.1
SRSF1Q07955 HSPA9-212ENST00000523929 780 ntTSL 413.76□□□□□ -0.213e-7■■□□□ 13.1
SRSF1Q07955 GRIPAP1-214ENST00000622231 367 ntTSL 513.43□□□□□ -0.263e-7■■□□□ 13.1
SRSF1Q07955 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.423e-7■■□□□ 13.1
SRSF1Q07955 FASN-211ENST00000637026 100 ntTSL 511.17□□□□□ -0.621e-10■■□□□ 13.1
SRSF1Q07955 PGK1-203ENST00000476531 960 ntTSL 210.52□□□□□ -0.731e-10■■□□□ 13.1
SRSF1Q07955 HSPA9-207ENST00000507097 1796 ntTSL 210.51□□□□□ -0.733e-7■■□□□ 13.1
SRSF1Q07955 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC10.4□□□□□ -0.743e-7■■□□□ 13.1
SRSF1Q07955 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.753e-7■■□□□ 13.1
SRSF1Q07955 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC10.2□□□□□ -0.783e-7■■□□□ 13.1
SRSF1Q07955 STK17B-202ENST00000409228 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.983e-7■■□□□ 13.1
SRSF1Q07955 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.011e-10■■□□□ 13.1
SRSF1Q07955 GRIPAP1-209ENST00000611757 3255 ntTSL 28.6□□□□□ -1.033e-7■■□□□ 13.1
SRSF1Q07955 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.133e-7■■□□□ 13.1
SRSF1Q07955 STK17B-203ENST00000420683 507 ntTSL 47.82□□□□□ -1.163e-7■■□□□ 13.1
Retrieved 100 of 14,836 protein–RNA pairs in 93.5 ms