Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.922e-8■■□□□ 12
LSM11P83369 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.632e-8■■□□□ 12
LSM11P83369 HSP90AA1-210ENST00000560130 488 ntTSL 210.15□□□□□ -0.783e-7■■□□□ 12
LSM11P83369 COL9A3-208ENST00000469802 680 ntTSL 214.08□□□□□ -0.162e-9■■□□□ 12
LSM11P83369 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.15□□□□□ -0.144e-12■■□□□ 12
LSM11P83369 KLC4-219ENST00000486439 756 ntTSL 212.66□□□□□ -0.381e-6■■□□□ 12
LSM11P83369 TIA1-207ENST00000454815 911 ntTSL 511.11□□□□□ -0.634e-12■■□□□ 12
LSM11P83369 TIA1-214ENST00000482876 562 ntTSL 59.95□□□□□ -0.824e-12■■□□□ 12
LSM11P83369 TIA1-217ENST00000495774 533 ntTSL 29.92□□□□□ -0.824e-12■■□□□ 12
LSM11P83369 TIA1-208ENST00000468787 525 ntTSL 39.35□□□□□ -0.914e-12■■□□□ 12
LSM11P83369 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.689e-8■■□□□ 12
LSM11P83369 IL17RB-202ENST00000475124 2822 ntTSL 28.63□□□□□ -1.039e-8■■□□□ 12
LSM11P83369 MST1-209ENST00000484269 1518 ntTSL 515.87■□□□□ 0.131e-10■■□□□ 12
LSM11P83369 MST1-207ENST00000481930 565 ntTSL 512.53□□□□□ -0.41e-10■■□□□ 12
LSM11P83369 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.73□□□□□ -0.052e-10■■□□□ 12
LSM11P83369 MOB1B-205ENST00000511449 627 ntTSL 314.73□□□□□ -0.052e-10■■□□□ 12
LSM11P83369 MOB1B-203ENST00000502869 760 ntTSL 314.02□□□□□ -0.172e-10■■□□□ 12
LSM11P83369 MOB1B-204ENST00000509041 2056 ntTSL 213.38□□□□□ -0.272e-10■■□□□ 12
LSM11P83369 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.042e-10■■□□□ 12
LSM11P83369 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.572e-10■■□□□ 12
LSM11P83369 TRMT1-222ENST00000593157 2127 ntTSL 218.73■□□□□ 0.594e-8■■□□□ 12
LSM11P83369 TRMT1-211ENST00000588511 2251 ntTSL 518.54■□□□□ 0.564e-8■■□□□ 12
LSM11P83369 DUS1L-213ENST00000580731 725 ntTSL 514.54□□□□□ -0.084e-8■■□□□ 12
LSM11P83369 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.124e-8■■□□□ 12
LSM11P83369 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.174e-8■■□□□ 12
LSM11P83369 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.194e-8■■□□□ 12
LSM11P83369 DUS1L-209ENST00000578428 688 ntTSL 213.69□□□□□ -0.224e-8■■□□□ 12
LSM11P83369 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.414e-8■■□□□ 12
LSM11P83369 GATD1-215ENST00000533960 299 ntTSL 211.18□□□□□ -0.622e-6■■□□□ 12
LSM11P83369 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.31□□□□□ -0.441e-9■■□□□ 12
LSM11P83369 LAMA5-210ENST00000491036 728 ntTSL 214.03□□□□□ -0.161e-11■■□□□ 11.9
LSM11P83369 FANCA-216ENST00000564870 460 ntTSL 39.05□□□□□ -0.966e-7■■□□□ 11.9
LSM11P83369 AGAP3-203ENST00000461065 1707 ntTSL 1 (best)14.69□□□□□ -0.062e-8■■□□□ 11.9
LSM11P83369 AGAP3-212ENST00000473633 3751 ntTSL 1 (best)8.86□□□□□ -0.992e-8■■□□□ 11.9
LSM11P83369 HNRNPA2B1-205ENST00000476233 1220 ntTSL 1 (best)14.19□□□□□ -0.146e-7■■□□□ 11.9
LSM11P83369 HNRNPA2B1-203ENST00000360787 1724 ntTSL 513.98□□□□□ -0.176e-7■■□□□ 11.9
LSM11P83369 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC10.41□□□□□ -0.746e-7■■□□□ 11.9
LSM11P83369 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.186e-7■■□□□ 11.9
LSM11P83369 TARDBP-210ENST00000496840 692 ntTSL 315.77■□□□□ 0.123e-9■■□□□ 11.9
LSM11P83369 TARDBP-224ENST00000621573 992 ntTSL 313.34□□□□□ -0.273e-9■■□□□ 11.9
LSM11P83369 TARDBP-231ENST00000639599 1283 ntTSL 512.85□□□□□ -0.353e-9■■□□□ 11.9
LSM11P83369 TARDBP-212ENST00000611008 929 ntTSL 512.53□□□□□ -0.43e-9■■□□□ 11.9
LSM11P83369 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.413e-9■■□□□ 11.9
LSM11P83369 TARDBP-214ENST00000613177 379 ntTSL 312.41□□□□□ -0.423e-9■■□□□ 11.9
LSM11P83369 TARDBP-202ENST00000315091 1835 ntTSL 5 BASIC11.67□□□□□ -0.543e-9■■□□□ 11.9
LSM11P83369 TTLL3-214ENST00000431204 1041 ntTSL 510.31□□□□□ -0.761e-7■■□□□ 11.9
LSM11P83369 TARDBP-206ENST00000473869 1946 ntTSL 59.95□□□□□ -0.823e-9■■□□□ 11.9
LSM11P83369 TARDBP-221ENST00000619555 682 ntTSL 59.71□□□□□ -0.863e-9■■□□□ 11.9
LSM11P83369 TARDBP-223ENST00000620632 706 ntTSL 39.59□□□□□ -0.873e-9■■□□□ 11.9
LSM11P83369 TARDBP-222ENST00000620505 657 ntTSL 59.3□□□□□ -0.923e-9■■□□□ 11.9
LSM11P83369 TARDBP-213ENST00000611963 739 ntTSL 58.94□□□□□ -0.983e-9■■□□□ 11.9
LSM11P83369 AL109811.4-203ENST00000612542 554 ntAPPRIS P1 TSL 58.89□□□□□ -0.993e-9■■□□□ 11.9
LSM11P83369 TTLL3-223ENST00000466245 616 ntTSL 38.74□□□□□ -1.011e-7■■□□□ 11.9
LSM11P83369 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC8.69□□□□□ -1.023e-9■■□□□ 11.9
LSM11P83369 TARDBP-211ENST00000610369 563 ntTSL 58.39□□□□□ -1.073e-9■■□□□ 11.9
LSM11P83369 TARDBP-216ENST00000614494 515 ntTSL 57.41□□□□□ -1.223e-9■■□□□ 11.9
LSM11P83369 TARDBP-208ENST00000477447 409 ntTSL 57.36□□□□□ -1.233e-9■■□□□ 11.9
LSM11P83369 AL109811.4-204ENST00000622108 645 ntTSL 57.33□□□□□ -1.243e-9■■□□□ 11.9
LSM11P83369 TARDBP-219ENST00000617757 434 ntTSL 37.31□□□□□ -1.243e-9■■□□□ 11.9
LSM11P83369 AL109811.4-202ENST00000611136 700 ntTSL 57.14□□□□□ -1.273e-9■■□□□ 11.9
LSM11P83369 PNISR-208ENST00000481229 395 ntTSL 313.84□□□□□ -0.192e-10■■□□□ 11.9
LSM11P83369 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.452e-10■■□□□ 11.9
LSM11P83369 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.732e-10■■□□□ 11.9
LSM11P83369 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.97■□□□□ 0.633e-6■■□□□ 11.9
LSM11P83369 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.64■□□□□ 0.093e-6■■□□□ 11.9
LSM11P83369 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.02□□□□□ -0.013e-6■■□□□ 11.9
LSM11P83369 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.013e-6■■□□□ 11.9
LSM11P83369 PABPC4-216ENST00000492468 2257 ntTSL 213.96□□□□□ -0.173e-6■■□□□ 11.9
LSM11P83369 PABPC4-213ENST00000482028 633 ntTSL 211.83□□□□□ -0.523e-6■■□□□ 11.9
LSM11P83369 PABPC4-206ENST00000437136 876 ntTSL 510.78□□□□□ -0.683e-6■■□□□ 11.9
LSM11P83369 PABPC4-209ENST00000468476 3592 ntTSL 28.32□□□□□ -1.083e-6■■□□□ 11.9
LSM11P83369 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.048e-9■■□□□ 11.9
LSM11P83369 DDX5-218ENST00000581693 2156 ntTSL 510.83□□□□□ -0.688e-9■■□□□ 11.9
LSM11P83369 DDX5-203ENST00000540698 2225 ntTSL 510.62□□□□□ -0.718e-9■■□□□ 11.9
LSM11P83369 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC10.13□□□□□ -0.798e-9■■□□□ 11.9
LSM11P83369 DDX5-215ENST00000581230 3558 ntTSL 27.68□□□□□ -1.188e-9■■□□□ 11.9
LSM11P83369 PLCB1-224ENST00000636319 2930 ntTSL 517.84■□□□□ 0.451e-11■■□□□ 11.9
LSM11P83369 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.59□□□□□ -0.071e-11■■□□□ 11.9
LSM11P83369 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.071e-11■■□□□ 11.9
LSM11P83369 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.75□□□□□ -0.211e-11■■□□□ 11.9
LSM11P83369 PLCB1-219ENST00000630495 759 ntTSL 59.72□□□□□ -0.851e-11■■□□□ 11.9
LSM11P83369 PLCB1-207ENST00000475958 443 ntTSL 38.56□□□□□ -1.041e-11■■□□□ 11.9
LSM11P83369 PLCB1-217ENST00000628900 560 ntTSL 47.83□□□□□ -1.161e-11■■□□□ 11.9
LSM11P83369 PLCB1-212ENST00000625874 3206 ntTSL 27.2□□□□□ -1.261e-11■■□□□ 11.9
LSM11P83369 PLCB1-227ENST00000636825 3020 ntTSL 57.09□□□□□ -1.281e-11■■□□□ 11.9
LSM11P83369 PLCB1-215ENST00000626966 2996 ntTSL 27□□□□□ -1.291e-11■■□□□ 11.9
LSM11P83369 PLCB1-221ENST00000635830 3237 ntTSL 56.71□□□□□ -1.341e-11■■□□□ 11.9
LSM11P83369 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.02□□□□□ -1.451e-11■■□□□ 11.9
LSM11P83369 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.87□□□□□ -1.631e-11■■□□□ 11.9
LSM11P83369 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.61□□□□□ -1.671e-11■■□□□ 11.9
LSM11P83369 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.89□□□□□ -1.791e-11■■□□□ 11.9
LSM11P83369 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.38■□□□□ 0.211e-8■■□□□ 11.9
LSM11P83369 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.131e-8■■□□□ 11.9
LSM11P83369 CTTN-213ENST00000529736 952 ntTSL 313.49□□□□□ -0.251e-8■■□□□ 11.9
LSM11P83369 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.331e-8■■□□□ 11.9
LSM11P83369 SORBS3-203ENST00000517535 3067 ntTSL 219.12■□□□□ 0.652e-6■■□□□ 11.9
LSM11P83369 SORBS3-208ENST00000520207 576 ntTSL 217.12■□□□□ 0.332e-6■■□□□ 11.9
LSM11P83369 MAN2A2-221ENST00000560451 5124 ntTSL 1 (best)17.71■□□□□ 0.434e-9■■□□□ 11.9
LSM11P83369 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.094e-9■■□□□ 11.9
LSM11P83369 MAN2A2-204ENST00000558161 4918 ntTSL 1 (best)10.84□□□□□ -0.674e-9■■□□□ 11.9
Retrieved 100 of 11,495 protein–RNA pairs in 58.1 ms