RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
TARDBP-214ENST00000613177 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
TARDBP-214ENST00000613177 SENP3Q9H4L4 574 aaPredicted RBP24.69■■□□□ 1.54
TARDBP-214ENST00000613177 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
TARDBP-214ENST00000613177 FOXD1Q16676 465 aa23.02■■□□□ 1.28
TARDBP-214ENST00000613177 PLPPR3Q6T4P5 718 aa22.11■■□□□ 1.13
TARDBP-214ENST00000613177 PPP6R1Q9UPN7 881 aa21.63■■□□□ 1.05
TARDBP-214ENST00000613177 ADRA2BP18089 450 aa21.54■■□□□ 1.04
TARDBP-214ENST00000613177 PIAS4Q8N2W9 510 aaPredicted RBP21.5■■□□□ 1.03
TARDBP-214ENST00000613177 MSH5O43196 834 aa21.46■■□□□ 1.03
TARDBP-214ENST00000613177 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
TARDBP-214ENST00000613177 MAPK8IP2Q13387 824 aaPredicted RBP19.75■□□□□ 0.75
TARDBP-214ENST00000613177 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
TARDBP-214ENST00000613177 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
TARDBP-214ENST00000613177 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
TARDBP-214ENST00000613177 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
TARDBP-214ENST00000613177 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
TARDBP-214ENST00000613177 RNF216Q9NWF9 866 aaPredicted RBP18.82■□□□□ 0.6
TARDBP-214ENST00000613177 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
TARDBP-214ENST00000613177 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
TARDBP-214ENST00000613177 NPM3O75607 178 aaKnown RBP18.44■□□□□ 0.54
TARDBP-214ENST00000613177 RNF39Q9H2S5 420 aa18.37■□□□□ 0.53
TARDBP-214ENST00000613177 CACNB1Q02641 598 aaPredicted RBP18.32■□□□□ 0.52
TARDBP-214ENST00000613177 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
TARDBP-214ENST00000613177 KCNA4P22459 653 aa18.19■□□□□ 0.5
TARDBP-214ENST00000613177 C1QBPQ07021 282 aaKnown RBP18.08■□□□□ 0.48
TARDBP-214ENST00000613177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.47
TARDBP-214ENST00000613177 U3KPZ7 1027 aaPredicted RBP17.69■□□□□ 0.42
TARDBP-214ENST00000613177 SLC4A2P04920 1241 aa17.61■□□□□ 0.41
TARDBP-214ENST00000613177 SPINK5Q9NQ38 1064 aaPredicted RBP17.38■□□□□ 0.37
TARDBP-214ENST00000613177 CAPN15O75808 1086 aa17.29■□□□□ 0.36
TARDBP-214ENST00000613177 DSG3P32926 999 aa17.22■□□□□ 0.35
TARDBP-214ENST00000613177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
TARDBP-214ENST00000613177 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
TARDBP-214ENST00000613177 SLC4A1APQ9BWU0 796 aaKnown RBP17.16■□□□□ 0.34
TARDBP-214ENST00000613177 APLP2Q06481 763 aa17.13■□□□□ 0.33
TARDBP-214ENST00000613177 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-214ENST00000613177 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
TARDBP-214ENST00000613177 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
TARDBP-214ENST00000613177 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
TARDBP-214ENST00000613177 ABCB7O75027 752 aa16.92■□□□□ 0.3
TARDBP-214ENST00000613177 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
TARDBP-214ENST00000613177 ZBTB22O15209 634 aa16.77■□□□□ 0.28
TARDBP-214ENST00000613177 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
TARDBP-214ENST00000613177 POLA2Q14181 598 aa16.63■□□□□ 0.25
TARDBP-214ENST00000613177 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
TARDBP-214ENST00000613177 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
TARDBP-214ENST00000613177 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
TARDBP-214ENST00000613177 POTEHQ6S545 545 aa16.29■□□□□ 0.2
TARDBP-214ENST00000613177 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
TARDBP-214ENST00000613177 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
TARDBP-214ENST00000613177 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
TARDBP-214ENST00000613177 CHRDL2Q6WN34 429 aa16.01■□□□□ 0.15
TARDBP-214ENST00000613177 FBLN2P98095 1184 aa15.93■□□□□ 0.14
TARDBP-214ENST00000613177 MKRN4PQ13434 485 aaPredicted RBP15.92■□□□□ 0.14
TARDBP-214ENST00000613177 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
TARDBP-214ENST00000613177 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
TARDBP-214ENST00000613177 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
TARDBP-214ENST00000613177 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
TARDBP-214ENST00000613177 SPDYE2Q495Y8 402 aa15.83■□□□□ 0.12
TARDBP-214ENST00000613177 PITPNM1O00562 1244 aa15.75■□□□□ 0.11
TARDBP-214ENST00000613177 SSUH2Q9Y2M2 353 aa15.67■□□□□ 0.1
TARDBP-214ENST00000613177 PIP4P2Q8N4L2 257 aa15.66■□□□□ 0.1
TARDBP-214ENST00000613177 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
TARDBP-214ENST00000613177 FXR2P51116 673 aaKnown RBP eCLIP15.6■□□□□ 0.09
TARDBP-214ENST00000613177 SPDYE1Q8NFV5 336 aaPredicted RBP15.51■□□□□ 0.07
TARDBP-214ENST00000613177 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
TARDBP-214ENST00000613177 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
TARDBP-214ENST00000613177 PRKAR2AP13861 404 aaKnown RBP15.32■□□□□ 0.04
TARDBP-214ENST00000613177 SP7Q8TDD2 431 aaPredicted RBP15.32■□□□□ 0.04
TARDBP-214ENST00000613177 HAX1O00165 279 aa15.29■□□□□ 0.04
TARDBP-214ENST00000613177 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
TARDBP-214ENST00000613177 EVX2Q03828 476 aa15.19■□□□□ 0.02
TARDBP-214ENST00000613177 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
TARDBP-214ENST00000613177 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
TARDBP-214ENST00000613177 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
TARDBP-214ENST00000613177 STAG3Q9UJ98 1225 aa15□□□□□ -0.01
TARDBP-214ENST00000613177 FARP1Q9Y4F1 1045 aaPredicted RBP14.97□□□□□ -0.01
TARDBP-214ENST00000613177 CREBZFQ9NS37 354 aa14.92□□□□□ -0.02
TARDBP-214ENST00000613177 PROM2Q8N271 834 aa14.91□□□□□ -0.02
TARDBP-214ENST00000613177 CD44P16070 742 aaKnown RBP14.84□□□□□ -0.03
TARDBP-214ENST00000613177 GABBR2O75899 941 aa14.82□□□□□ -0.04
TARDBP-214ENST00000613177 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
TARDBP-214ENST00000613177 ZNF579Q8NAF0 562 aaKnown RBP14.65□□□□□ -0.06
TARDBP-214ENST00000613177 ZRANB1Q9UGI0 708 aa14.63□□□□□ -0.07
TARDBP-214ENST00000613177 CLCN6P51797 869 aa14.61□□□□□ -0.07
TARDBP-214ENST00000613177 NPM1P06748 294 aaKnown RBP eCLIP14.59□□□□□ -0.07
TARDBP-214ENST00000613177 POTEIP0CG38 1075 aa14.56□□□□□ -0.08
TARDBP-214ENST00000613177 FKBP8Q14318 412 aa14.52□□□□□ -0.09
TARDBP-214ENST00000613177 PAK3O75914 559 aaPredicted RBP14.5□□□□□ -0.09
TARDBP-214ENST00000613177 PHF12Q96QT6 1004 aa14.47□□□□□ -0.09
TARDBP-214ENST00000613177 GALR2O43603 387 aaPredicted RBP14.45□□□□□ -0.1
TARDBP-214ENST00000613177 MIER1Q8N108 512 aa14.42□□□□□ -0.1
TARDBP-214ENST00000613177 DCBLD2Q96PD2 775 aa14.4□□□□□ -0.1
TARDBP-214ENST00000613177 LHX8Q68G74 356 aa14.36□□□□□ -0.11
TARDBP-214ENST00000613177 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
TARDBP-214ENST00000613177 TSPYL2Q9H2G4 693 aaPredicted RBP14.33□□□□□ -0.12
TARDBP-214ENST00000613177 CCDC61Q9Y6R9 512 aa14.33□□□□□ -0.12
TARDBP-214ENST00000613177 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
TARDBP-214ENST00000613177 RASEFQ8IZ41 740 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms