RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 AEBP2Q6ZN18 517 aaPredicted RBP29.34■■■□□ 2.29
TARDBP-212ENST00000611008 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
TARDBP-212ENST00000611008 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
TARDBP-212ENST00000611008 PHF23Q9BUL5 403 aaPredicted RBP24.76■■□□□ 1.55
TARDBP-212ENST00000611008 FOXD1Q16676 465 aa23.42■■□□□ 1.34
TARDBP-212ENST00000611008 MSH5O43196 834 aa22.07■■□□□ 1.12
TARDBP-212ENST00000611008 PLPPR3Q6T4P5 718 aa22.01■■□□□ 1.11
TARDBP-212ENST00000611008 POTEDQ86YR6 584 aa21.93■■□□□ 1.1
TARDBP-212ENST00000611008 PIAS4Q8N2W9 510 aaPredicted RBP21.86■■□□□ 1.09
TARDBP-212ENST00000611008 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
TARDBP-212ENST00000611008 ADRA2BP18089 450 aa21.62■■□□□ 1.05
TARDBP-212ENST00000611008 MAPK8IP2Q13387 824 aaPredicted RBP19.93■□□□□ 0.78
TARDBP-212ENST00000611008 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
TARDBP-212ENST00000611008 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
TARDBP-212ENST00000611008 PPP4R3CPQ6ZMV5 832 aa19.24■□□□□ 0.67
TARDBP-212ENST00000611008 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
TARDBP-212ENST00000611008 CACNB1Q02641 598 aaPredicted RBP19.11■□□□□ 0.65
TARDBP-212ENST00000611008 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
TARDBP-212ENST00000611008 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
TARDBP-212ENST00000611008 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
TARDBP-212ENST00000611008 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
TARDBP-212ENST00000611008 C1QBPQ07021 282 aaKnown RBP18.51■□□□□ 0.55
TARDBP-212ENST00000611008 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
TARDBP-212ENST00000611008 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
TARDBP-212ENST00000611008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.5
TARDBP-212ENST00000611008 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
TARDBP-212ENST00000611008 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
TARDBP-212ENST00000611008 CAPN15O75808 1086 aa17.59■□□□□ 0.41
TARDBP-212ENST00000611008 KCNA4P22459 653 aa17.57■□□□□ 0.4
TARDBP-212ENST00000611008 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
TARDBP-212ENST00000611008 DSG3P32926 999 aa17.49■□□□□ 0.39
TARDBP-212ENST00000611008 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
TARDBP-212ENST00000611008 APLP2Q06481 763 aa17.29■□□□□ 0.36
TARDBP-212ENST00000611008 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
TARDBP-212ENST00000611008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
TARDBP-212ENST00000611008 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
TARDBP-212ENST00000611008 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
TARDBP-212ENST00000611008 POTEHQ6S545 545 aa17.16■□□□□ 0.34
TARDBP-212ENST00000611008 ABCB7O75027 752 aa17.13■□□□□ 0.33
TARDBP-212ENST00000611008 SAMD1Q6SPF0 538 aaPredicted RBP17.07■□□□□ 0.32
TARDBP-212ENST00000611008 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
TARDBP-212ENST00000611008 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
TARDBP-212ENST00000611008 POLA2Q14181 598 aa16.7■□□□□ 0.26
TARDBP-212ENST00000611008 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
TARDBP-212ENST00000611008 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
TARDBP-212ENST00000611008 CHRDL2Q6WN34 429 aa16.46■□□□□ 0.23
TARDBP-212ENST00000611008 ATF5Q9Y2D1 282 aaPredicted RBP16.4■□□□□ 0.22
TARDBP-212ENST00000611008 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
TARDBP-212ENST00000611008 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
TARDBP-212ENST00000611008 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
TARDBP-212ENST00000611008 ZBTB22O15209 634 aa16.12■□□□□ 0.17
TARDBP-212ENST00000611008 REM2Q8IYK8 340 aaPredicted RBP16.12■□□□□ 0.17
TARDBP-212ENST00000611008 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.16
TARDBP-212ENST00000611008 PIP4P2Q8N4L2 257 aa15.99■□□□□ 0.15
TARDBP-212ENST00000611008 SP7Q8TDD2 431 aaPredicted RBP15.97■□□□□ 0.15
TARDBP-212ENST00000611008 PITPNM1O00562 1244 aa15.95■□□□□ 0.14
TARDBP-212ENST00000611008 FBLN2P98095 1184 aa15.87■□□□□ 0.13
TARDBP-212ENST00000611008 FXR2P51116 673 aaKnown RBP eCLIP15.85■□□□□ 0.13
TARDBP-212ENST00000611008 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
TARDBP-212ENST00000611008 HAX1O00165 279 aa15.82■□□□□ 0.12
TARDBP-212ENST00000611008 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
TARDBP-212ENST00000611008 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
TARDBP-212ENST00000611008 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
TARDBP-212ENST00000611008 CLEC11AQ9Y240 323 aa15.63■□□□□ 0.09
TARDBP-212ENST00000611008 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
TARDBP-212ENST00000611008 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
TARDBP-212ENST00000611008 PRKAR2AP13861 404 aaKnown RBP15.56■□□□□ 0.08
TARDBP-212ENST00000611008 SSUH2Q9Y2M2 353 aa15.55■□□□□ 0.08
TARDBP-212ENST00000611008 EVX2Q03828 476 aa15.53■□□□□ 0.08
TARDBP-212ENST00000611008 C19orf67A6NJJ6 358 aa15.35■□□□□ 0.05
TARDBP-212ENST00000611008 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.05
TARDBP-212ENST00000611008 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
TARDBP-212ENST00000611008 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
TARDBP-212ENST00000611008 GABBR2O75899 941 aa15.2■□□□□ 0.02
TARDBP-212ENST00000611008 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
TARDBP-212ENST00000611008 FARP1Q9Y4F1 1045 aaPredicted RBP15.07■□□□□ 0
TARDBP-212ENST00000611008 CD44P16070 742 aaKnown RBP15.05■□□□□ -0
TARDBP-212ENST00000611008 LHX8Q68G74 356 aa14.98□□□□□ -0.01
TARDBP-212ENST00000611008 CLCN6P51797 869 aa14.91□□□□□ -0.02
TARDBP-212ENST00000611008 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
TARDBP-212ENST00000611008 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
TARDBP-212ENST00000611008 POTEIP0CG38 1075 aa14.84□□□□□ -0.03
TARDBP-212ENST00000611008 CREBZFQ9NS37 354 aa14.83□□□□□ -0.04
TARDBP-212ENST00000611008 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
TARDBP-212ENST00000611008 ZRANB1Q9UGI0 708 aa14.81□□□□□ -0.04
TARDBP-212ENST00000611008 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
TARDBP-212ENST00000611008 DCBLD2Q96PD2 775 aa14.79□□□□□ -0.04
TARDBP-212ENST00000611008 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
TARDBP-212ENST00000611008 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
TARDBP-212ENST00000611008 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
TARDBP-212ENST00000611008 PHF12Q96QT6 1004 aa14.55□□□□□ -0.08
TARDBP-212ENST00000611008 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.09
TARDBP-212ENST00000611008 OTUD5Q96G74 571 aa14.37□□□□□ -0.11
TARDBP-212ENST00000611008 PROM2Q8N271 834 aa14.36□□□□□ -0.11
TARDBP-212ENST00000611008 POTEB2H3BUK9 544 aa14.35□□□□□ -0.11
TARDBP-212ENST00000611008 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
TARDBP-212ENST00000611008 MS4A3Q96HJ5 214 aa14.34□□□□□ -0.11
TARDBP-212ENST00000611008 TSPYL2Q9H2G4 693 aaPredicted RBP14.33□□□□□ -0.12
TARDBP-212ENST00000611008 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
TARDBP-212ENST00000611008 METRNQ9UJH8 293 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms