RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 AEBP2Q6ZN18 517 aaPredicted RBP36.41■■■■□ 3.42
TARDBP-210ENST00000496840 CHIC1Q5VXU3 224 aa35.35■■■■□ 3.25
TARDBP-210ENST00000496840 PHF23Q9BUL5 403 aaPredicted RBP31.01■■■□□ 2.55
TARDBP-210ENST00000496840 SENP3Q9H4L4 574 aaPredicted RBP31■■■□□ 2.55
TARDBP-210ENST00000496840 FOXD1Q16676 465 aa28.76■■■□□ 2.19
TARDBP-210ENST00000496840 PLPPR3Q6T4P5 718 aa28.59■■■□□ 2.17
TARDBP-210ENST00000496840 PPP6R1Q9UPN7 881 aa27.43■■□□□ 1.98
TARDBP-210ENST00000496840 ADRA2BP18089 450 aa27.37■■□□□ 1.97
TARDBP-210ENST00000496840 POTEDQ86YR6 584 aa27.22■■□□□ 1.95
TARDBP-210ENST00000496840 PIAS4Q8N2W9 510 aaPredicted RBP27.04■■□□□ 1.92
TARDBP-210ENST00000496840 MSH5O43196 834 aa26.69■■□□□ 1.86
TARDBP-210ENST00000496840 SCAF1Q9H7N4 1312 aaKnown RBP25.13■■□□□ 1.61
TARDBP-210ENST00000496840 PPP4R3CPQ6ZMV5 832 aa25.12■■□□□ 1.61
TARDBP-210ENST00000496840 MAPK8IP2Q13387 824 aaPredicted RBP24.91■■□□□ 1.58
TARDBP-210ENST00000496840 DMRT2Q9Y5R5 561 aa24.7■■□□□ 1.54
TARDBP-210ENST00000496840 CNKSR2Q8WXI2 1034 aa24.51■■□□□ 1.51
TARDBP-210ENST00000496840 NCBP3Q53F19 620 aaKnown RBP24.41■■□□□ 1.5
TARDBP-210ENST00000496840 KCNA4P22459 653 aa24.2■■□□□ 1.46
TARDBP-210ENST00000496840 RNF216Q9NWF9 866 aaPredicted RBP24.12■■□□□ 1.45
TARDBP-210ENST00000496840 HOXD11P31277 338 aaPredicted RBP24.1■■□□□ 1.45
TARDBP-210ENST00000496840 NPM3O75607 178 aaKnown RBP24.03■■□□□ 1.44
TARDBP-210ENST00000496840 DCAF8L1A6NGE4 600 aa23.54■■□□□ 1.36
TARDBP-210ENST00000496840 DNAJC5BQ9UF47 199 aa23.52■■□□□ 1.36
TARDBP-210ENST00000496840 CACNB1Q02641 598 aaPredicted RBP23.12■■□□□ 1.29
TARDBP-210ENST00000496840 SLC4A1APQ9BWU0 796 aaKnown RBP23■■□□□ 1.27
TARDBP-210ENST00000496840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.26
TARDBP-210ENST00000496840 RNF39Q9H2S5 420 aa22.82■■□□□ 1.24
TARDBP-210ENST00000496840 SLC4A2P04920 1241 aa22.76■■□□□ 1.23
TARDBP-210ENST00000496840 C1QBPQ07021 282 aaKnown RBP22.56■■□□□ 1.2
TARDBP-210ENST00000496840 U3KPZ7 1027 aaPredicted RBP22.52■■□□□ 1.2
TARDBP-210ENST00000496840 FOXD4L1Q9NU39 408 aa22.4■■□□□ 1.18
TARDBP-210ENST00000496840 ZBTB22O15209 634 aa22.26■■□□□ 1.15
TARDBP-210ENST00000496840 MYCNP04198 464 aaPredicted RBP22.24■■□□□ 1.15
TARDBP-210ENST00000496840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
TARDBP-210ENST00000496840 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
TARDBP-210ENST00000496840 SAMD1Q6SPF0 538 aaPredicted RBP22.09■■□□□ 1.13
TARDBP-210ENST00000496840 APLP2Q06481 763 aa22.04■■□□□ 1.12
TARDBP-210ENST00000496840 EHMT2Q96KQ7 1210 aa21.96■■□□□ 1.11
TARDBP-210ENST00000496840 SPINK5Q9NQ38 1064 aaPredicted RBP21.94■■□□□ 1.1
TARDBP-210ENST00000496840 CSRNP3Q8WYN3 585 aa21.92■■□□□ 1.1
TARDBP-210ENST00000496840 CAPN15O75808 1086 aa21.86■■□□□ 1.09
TARDBP-210ENST00000496840 ZNF219Q9P2Y4 722 aaPredicted RBP21.75■■□□□ 1.07
TARDBP-210ENST00000496840 ATXN8OSP0DMR3 200 aa21.69■■□□□ 1.06
TARDBP-210ENST00000496840 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
TARDBP-210ENST00000496840 DSG3P32926 999 aa21.6■■□□□ 1.05
TARDBP-210ENST00000496840 ATF5Q9Y2D1 282 aaPredicted RBP21.6■■□□□ 1.05
TARDBP-210ENST00000496840 ABCB7O75027 752 aa21.39■■□□□ 1.01
TARDBP-210ENST00000496840 POLA2Q14181 598 aa21.29■■□□□ 1
TARDBP-210ENST00000496840 POTEHQ6S545 545 aa21.13■□□□□ 0.97
TARDBP-210ENST00000496840 ZBTB12Q9Y330 459 aaPredicted RBP21■□□□□ 0.95
TARDBP-210ENST00000496840 FBLN2P98095 1184 aa20.76■□□□□ 0.91
TARDBP-210ENST00000496840 MKRN4PQ13434 485 aaPredicted RBP20.67■□□□□ 0.9
TARDBP-210ENST00000496840 RBM42Q9BTD8 480 aaKnown RBP20.64■□□□□ 0.89
TARDBP-210ENST00000496840 OSCARQ8IYS5 282 aa20.57■□□□□ 0.88
TARDBP-210ENST00000496840 SPDYE2BA6NHP3 402 aa20.4■□□□□ 0.86
TARDBP-210ENST00000496840 SPDYE6P0CI01 402 aa20.4■□□□□ 0.86
TARDBP-210ENST00000496840 SPDYE2Q495Y8 402 aa20.4■□□□□ 0.86
TARDBP-210ENST00000496840 AKT1S1Q96B36 256 aa20.31■□□□□ 0.84
TARDBP-210ENST00000496840 ZNF692Q9BU19 519 aaPredicted RBP20.22■□□□□ 0.83
TARDBP-210ENST00000496840 SSUH2Q9Y2M2 353 aa20.21■□□□□ 0.83
TARDBP-210ENST00000496840 SPDYE4A6NLX3 237 aa20.08■□□□□ 0.81
TARDBP-210ENST00000496840 REM2Q8IYK8 340 aaPredicted RBP20.08■□□□□ 0.81
TARDBP-210ENST00000496840 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
TARDBP-210ENST00000496840 PITPNM1O00562 1244 aa19.85■□□□□ 0.77
TARDBP-210ENST00000496840 CHRDL2Q6WN34 429 aa19.84■□□□□ 0.77
TARDBP-210ENST00000496840 SPDYE1Q8NFV5 336 aaPredicted RBP19.84■□□□□ 0.77
TARDBP-210ENST00000496840 FKBP8Q14318 412 aa19.81■□□□□ 0.76
TARDBP-210ENST00000496840 PROM2Q8N271 834 aa19.78■□□□□ 0.76
TARDBP-210ENST00000496840 CLEC11AQ9Y240 323 aa19.69■□□□□ 0.74
TARDBP-210ENST00000496840 STAG3Q9UJ98 1225 aa19.62■□□□□ 0.73
TARDBP-210ENST00000496840 FXR2P51116 673 aaKnown RBP eCLIP19.57■□□□□ 0.72
TARDBP-210ENST00000496840 PIP4P2Q8N4L2 257 aa19.53■□□□□ 0.72
TARDBP-210ENST00000496840 PRR29P0C7W0 189 aa19.52■□□□□ 0.72
TARDBP-210ENST00000496840 SP7Q8TDD2 431 aaPredicted RBP19.44■□□□□ 0.7
TARDBP-210ENST00000496840 PRKAR2AP13861 404 aaKnown RBP19.34■□□□□ 0.69
TARDBP-210ENST00000496840 FBXO3Q9UK99 471 aa19.25■□□□□ 0.67
TARDBP-210ENST00000496840 CHADLQ6NUI6 762 aa19.23■□□□□ 0.67
TARDBP-210ENST00000496840 CREBZFQ9NS37 354 aa19.22■□□□□ 0.67
TARDBP-210ENST00000496840 FARP1Q9Y4F1 1045 aaPredicted RBP19.09■□□□□ 0.65
TARDBP-210ENST00000496840 MIER1Q8N108 512 aa19.04■□□□□ 0.64
TARDBP-210ENST00000496840 PLEKHG5O94827 1062 aa19.02■□□□□ 0.64
TARDBP-210ENST00000496840 MNX1P50219 401 aaPredicted RBP19■□□□□ 0.63
TARDBP-210ENST00000496840 PLCD3Q8N3E9 789 aa18.99■□□□□ 0.63
TARDBP-210ENST00000496840 VASPP50552 380 aaPredicted RBP18.96■□□□□ 0.63
TARDBP-210ENST00000496840 HAX1O00165 279 aa18.94■□□□□ 0.62
TARDBP-210ENST00000496840 NPM1P06748 294 aaKnown RBP eCLIP18.91■□□□□ 0.62
TARDBP-210ENST00000496840 C19orf67A6NJJ6 358 aa18.9■□□□□ 0.62
TARDBP-210ENST00000496840 ZBTB47Q9UFB7 747 aaPredicted RBP18.88■□□□□ 0.61
TARDBP-210ENST00000496840 CD44P16070 742 aaKnown RBP18.77■□□□□ 0.6
TARDBP-210ENST00000496840 EVX2Q03828 476 aa18.75■□□□□ 0.59
TARDBP-210ENST00000496840 IFNLR1Q8IU57 520 aaPredicted RBP18.67■□□□□ 0.58
TARDBP-210ENST00000496840 PAK3O75914 559 aaPredicted RBP18.66■□□□□ 0.58
TARDBP-210ENST00000496840 KLHL34Q8N239 644 aa18.66■□□□□ 0.58
TARDBP-210ENST00000496840 NUBP1P53384 320 aa18.63■□□□□ 0.57
TARDBP-210ENST00000496840 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
TARDBP-210ENST00000496840 RASEFQ8IZ41 740 aa18.59■□□□□ 0.57
TARDBP-210ENST00000496840 ZNF579Q8NAF0 562 aaKnown RBP18.56■□□□□ 0.56
TARDBP-210ENST00000496840 TSPYL2Q9H2G4 693 aaPredicted RBP18.52■□□□□ 0.56
TARDBP-210ENST00000496840 SPOCK2Q92563 424 aa18.51■□□□□ 0.55
TARDBP-210ENST00000496840 CLCN6P51797 869 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms