Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22■■□□□ 1.11
EPHB4P54760 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
EPHB4P54760 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22■■□□□ 1.11
EPHB4P54760 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
EPHB4P54760 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.99■■□□□ 1.11
EPHB4P54760 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
EPHB4P54760 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.99■■□□□ 1.11
EPHB4P54760 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.99■■□□□ 1.11
EPHB4P54760 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.99■■□□□ 1.11
EPHB4P54760 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.99■■□□□ 1.11
EPHB4P54760 AL358472.4-201ENST00000633140 710 ntBASIC21.99■■□□□ 1.11
EPHB4P54760 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.99■■□□□ 1.11
EPHB4P54760 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.99■■□□□ 1.11
EPHB4P54760 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
EPHB4P54760 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
EPHB4P54760 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
EPHB4P54760 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
EPHB4P54760 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
EPHB4P54760 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
EPHB4P54760 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
EPHB4P54760 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
EPHB4P54760 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.98■■□□□ 1.11
EPHB4P54760 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
EPHB4P54760 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.98■■□□□ 1.11
EPHB4P54760 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.98■■□□□ 1.11
EPHB4P54760 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
EPHB4P54760 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.98■■□□□ 1.11
EPHB4P54760 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
EPHB4P54760 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.98■■□□□ 1.11
EPHB4P54760 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
EPHB4P54760 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
EPHB4P54760 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
EPHB4P54760 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.98■■□□□ 1.11
EPHB4P54760 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.98■■□□□ 1.11
EPHB4P54760 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
EPHB4P54760 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
EPHB4P54760 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.98■■□□□ 1.11
EPHB4P54760 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.98■■□□□ 1.11
EPHB4P54760 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
EPHB4P54760 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
EPHB4P54760 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
EPHB4P54760 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
EPHB4P54760 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
EPHB4P54760 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.97■■□□□ 1.11
EPHB4P54760 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
EPHB4P54760 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
EPHB4P54760 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.97■■□□□ 1.11
EPHB4P54760 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.97■■□□□ 1.11
EPHB4P54760 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.97■■□□□ 1.11
EPHB4P54760 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
EPHB4P54760 AC004264.1-201ENST00000608354 794 ntBASIC21.97■■□□□ 1.11
EPHB4P54760 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
EPHB4P54760 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.97■■□□□ 1.11
EPHB4P54760 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
EPHB4P54760 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
EPHB4P54760 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
EPHB4P54760 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
EPHB4P54760 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
EPHB4P54760 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
EPHB4P54760 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.96■■□□□ 1.11
EPHB4P54760 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
EPHB4P54760 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
EPHB4P54760 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
EPHB4P54760 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.96■■□□□ 1.11
EPHB4P54760 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.96■■□□□ 1.11
EPHB4P54760 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.96■■□□□ 1.11
EPHB4P54760 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.96■■□□□ 1.11
EPHB4P54760 AC023632.3-201ENST00000521633 145 ntBASIC21.96■■□□□ 1.11
EPHB4P54760 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.96■■□□□ 1.11
EPHB4P54760 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.96■■□□□ 1.11
EPHB4P54760 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.96■■□□□ 1.11
EPHB4P54760 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
EPHB4P54760 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
EPHB4P54760 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
EPHB4P54760 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.96■■□□□ 1.11
EPHB4P54760 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
EPHB4P54760 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.95■■□□□ 1.1
EPHB4P54760 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
EPHB4P54760 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EPHB4P54760 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
EPHB4P54760 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.95■■□□□ 1.1
EPHB4P54760 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
EPHB4P54760 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EPHB4P54760 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
EPHB4P54760 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
EPHB4P54760 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.95■■□□□ 1.1
EPHB4P54760 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.95■■□□□ 1.1
EPHB4P54760 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EPHB4P54760 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.95■■□□□ 1.1
EPHB4P54760 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.95■■□□□ 1.1
EPHB4P54760 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.95■■□□□ 1.1
EPHB4P54760 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.95■■□□□ 1.1
EPHB4P54760 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.95■■□□□ 1.1
EPHB4P54760 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EPHB4P54760 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
EPHB4P54760 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
EPHB4P54760 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.95■■□□□ 1.1
EPHB4P54760 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
EPHB4P54760 AC073314.1-201ENST00000568729 2216 ntBASIC21.95■■□□□ 1.1
EPHB4P54760 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms