Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3BP20337 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAB3BP20337 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB3BP20337 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RAB3BP20337 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RAB3BP20337 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB3BP20337 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RAB3BP20337 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RAB3BP20337 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB3BP20337 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3BP20337 AC096631.2-201ENST00000436136 790 ntBASIC17.15■□□□□ 0.34
RAB3BP20337 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3BP20337 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.15■□□□□ 0.34
RAB3BP20337 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB3BP20337 SLC7A5P1-201ENST00000568957 537 ntBASIC17.15■□□□□ 0.34
RAB3BP20337 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB3BP20337 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3BP20337 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3BP20337 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3BP20337 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RAB3BP20337 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3BP20337 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB3BP20337 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3BP20337 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RAB3BP20337 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3BP20337 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3BP20337 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3BP20337 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB3BP20337 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3BP20337 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RAB3BP20337 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RAB3BP20337 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3BP20337 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3BP20337 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3BP20337 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3BP20337 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB3BP20337 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3BP20337 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB3BP20337 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.14■□□□□ 0.33
RAB3BP20337 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB3BP20337 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3BP20337 AL031963.3-201ENST00000606441 850 ntBASIC17.14■□□□□ 0.33
RAB3BP20337 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3BP20337 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3BP20337 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAB3BP20337 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3BP20337 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3BP20337 AC104581.1-202ENST00000635932 2618 ntBASIC17.14■□□□□ 0.33
RAB3BP20337 AL161938.1-201ENST00000569833 2180 ntBASIC17.13■□□□□ 0.33
RAB3BP20337 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RAB3BP20337 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB3BP20337 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB3BP20337 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
RAB3BP20337 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB3BP20337 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB3BP20337 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB3BP20337 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB3BP20337 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB3BP20337 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB3BP20337 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB3BP20337 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB3BP20337 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3BP20337 KRT8P20-201ENST00000423953 1409 ntBASIC17.13■□□□□ 0.33
RAB3BP20337 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RAB3BP20337 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB3BP20337 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB3BP20337 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3BP20337 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB3BP20337 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms