Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT3P12035 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT3P12035 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
KRT3P12035 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT3P12035 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.64■□□□□ 0.89
KRT3P12035 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT3P12035 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KRT3P12035 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KRT3P12035 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT3P12035 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT3P12035 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT3P12035 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT3P12035 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT3P12035 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT3P12035 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT3P12035 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT3P12035 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT3P12035 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT3P12035 AC116562.4-201ENST00000641316 2276 ntBASIC20.62■□□□□ 0.89
KRT3P12035 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT3P12035 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT3P12035 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KRT3P12035 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
KRT3P12035 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT3P12035 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT3P12035 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT3P12035 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.62■□□□□ 0.89
KRT3P12035 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
KRT3P12035 KRT18P6-201ENST00000555540 1265 ntBASIC20.62■□□□□ 0.89
KRT3P12035 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT3P12035 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT3P12035 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
KRT3P12035 AL121829.2-201ENST00000620908 328 ntBASIC20.62■□□□□ 0.89
KRT3P12035 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT3P12035 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT3P12035 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT3P12035 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT3P12035 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT3P12035 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
KRT3P12035 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
KRT3P12035 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT3P12035 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT3P12035 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT3P12035 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT3P12035 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT3P12035 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT3P12035 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT3P12035 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT3P12035 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT3P12035 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.61■□□□□ 0.89
KRT3P12035 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT3P12035 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT3P12035 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT3P12035 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT3P12035 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
KRT3P12035 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT3P12035 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
KRT3P12035 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT3P12035 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT3P12035 AC138932.1-201ENST00000534164 6830 ntBASIC20.6■□□□□ 0.89
KRT3P12035 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
KRT3P12035 AP006587.1-201ENST00000534129 1502 ntBASIC20.6■□□□□ 0.89
KRT3P12035 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
KRT3P12035 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT3P12035 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT3P12035 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT3P12035 POM121L13P-201ENST00000422362 380 ntBASIC20.6■□□□□ 0.89
KRT3P12035 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.6■□□□□ 0.89
KRT3P12035 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT3P12035 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT3P12035 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT3P12035 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.6■□□□□ 0.89
KRT3P12035 AC008403.3-201ENST00000598924 454 ntBASIC20.6■□□□□ 0.89
KRT3P12035 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
KRT3P12035 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
KRT3P12035 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT3P12035 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
KRT3P12035 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT3P12035 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT3P12035 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT3P12035 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT3P12035 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
KRT3P12035 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT3P12035 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT3P12035 AC093484.2-201ENST00000580996 2166 ntBASIC20.59■□□□□ 0.89
KRT3P12035 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT3P12035 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT3P12035 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms