Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC27.17■■□□□ 1.94
BRD4O60885 DGCR10-201ENST00000609839 495 ntBASIC27.17■■□□□ 1.94
BRD4O60885 AC010947.1-201ENST00000623454 693 ntBASIC27.17■■□□□ 1.94
BRD4O60885 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
BRD4O60885 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
BRD4O60885 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
BRD4O60885 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC27.16■■□□□ 1.94
BRD4O60885 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC27.16■■□□□ 1.94
BRD4O60885 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
BRD4O60885 AC073508.3-201ENST00000619697 1419 ntBASIC27.16■■□□□ 1.94
BRD4O60885 LINC01568-207ENST00000641790 1380 ntBASIC27.16■■□□□ 1.94
BRD4O60885 KRT18P22-201ENST00000402024 1347 ntBASIC27.16■■□□□ 1.94
BRD4O60885 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
BRD4O60885 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC27.16■■□□□ 1.94
BRD4O60885 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
BRD4O60885 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC27.16■■□□□ 1.94
BRD4O60885 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC27.16■■□□□ 1.94
BRD4O60885 KRT18P35-201ENST00000510488 1269 ntBASIC27.16■■□□□ 1.94
BRD4O60885 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
BRD4O60885 DUT-205ENST00000558813 769 ntTSL 2 BASIC27.16■■□□□ 1.94
BRD4O60885 CR392000.1-201ENST00000624770 1228 ntBASIC27.16■■□□□ 1.94
BRD4O60885 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC27.16■■□□□ 1.94
BRD4O60885 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC27.16■■□□□ 1.94
BRD4O60885 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
BRD4O60885 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC27.16■■□□□ 1.94
BRD4O60885 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
BRD4O60885 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
BRD4O60885 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
BRD4O60885 ME2-218ENST00000640965 2476 ntTSL 5 BASIC27.15■■□□□ 1.94
BRD4O60885 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
BRD4O60885 CRAT-202ENST00000393384 973 ntTSL 2 BASIC27.15■■□□□ 1.94
BRD4O60885 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC27.15■■□□□ 1.94
BRD4O60885 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
BRD4O60885 AL590326.2-201ENST00000625139 305 ntBASIC27.15■■□□□ 1.94
BRD4O60885 AL031985.4-201ENST00000642138 673 ntBASIC27.15■■□□□ 1.94
BRD4O60885 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
BRD4O60885 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC27.15■■□□□ 1.94
BRD4O60885 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC27.15■■□□□ 1.94
BRD4O60885 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC27.14■■□□□ 1.94
BRD4O60885 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC27.14■■□□□ 1.94
BRD4O60885 AC005521.1-201ENST00000393351 872 ntBASIC27.14■■□□□ 1.94
BRD4O60885 PPP1R14BP5-201ENST00000440334 435 ntBASIC27.14■■□□□ 1.94
BRD4O60885 AP005242.2-201ENST00000580065 1175 ntBASIC27.14■■□□□ 1.94
BRD4O60885 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
BRD4O60885 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
BRD4O60885 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
BRD4O60885 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC27.14■■□□□ 1.94
BRD4O60885 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
BRD4O60885 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
BRD4O60885 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
BRD4O60885 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC27.14■■□□□ 1.93
BRD4O60885 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
BRD4O60885 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
BRD4O60885 CYP2D8P-201ENST00000433633 1490 ntBASIC27.13■■□□□ 1.93
BRD4O60885 TERF1P1-201ENST00000311003 1181 ntBASIC27.13■■□□□ 1.93
BRD4O60885 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
BRD4O60885 MESTP1-201ENST00000404287 994 ntBASIC27.13■■□□□ 1.93
BRD4O60885 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC27.13■■□□□ 1.93
BRD4O60885 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC27.13■■□□□ 1.93
BRD4O60885 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
BRD4O60885 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
BRD4O60885 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
BRD4O60885 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC27.13■■□□□ 1.93
BRD4O60885 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
BRD4O60885 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
BRD4O60885 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC27.13■■□□□ 1.93
BRD4O60885 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
BRD4O60885 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BRD4O60885 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
BRD4O60885 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC27.12■■□□□ 1.93
BRD4O60885 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
BRD4O60885 YBX1P10-201ENST00000444752 975 ntBASIC27.12■■□□□ 1.93
BRD4O60885 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC27.12■■□□□ 1.93
BRD4O60885 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
BRD4O60885 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC27.12■■□□□ 1.93
BRD4O60885 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BRD4O60885 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC27.12■■□□□ 1.93
BRD4O60885 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
BRD4O60885 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
BRD4O60885 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BRD4O60885 FSCN1P1-201ENST00000568912 1481 ntBASIC27.12■■□□□ 1.93
BRD4O60885 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
BRD4O60885 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
BRD4O60885 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
BRD4O60885 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
BRD4O60885 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC27.11■■□□□ 1.93
BRD4O60885 SLC25A3P1-201ENST00000443844 931 ntBASIC27.11■■□□□ 1.93
BRD4O60885 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC27.11■■□□□ 1.93
BRD4O60885 AC116351.2-201ENST00000606540 1585 ntBASIC27.11■■□□□ 1.93
BRD4O60885 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC27.11■■□□□ 1.93
BRD4O60885 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
BRD4O60885 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
BRD4O60885 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC27.11■■□□□ 1.93
BRD4O60885 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
BRD4O60885 AL390955.1-201ENST00000428694 934 ntBASIC27.1■■□□□ 1.93
BRD4O60885 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC27.1■■□□□ 1.93
BRD4O60885 AL049597.2-201ENST00000565575 961 ntBASIC27.1■■□□□ 1.93
BRD4O60885 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC27.1■■□□□ 1.93
BRD4O60885 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC27.1■■□□□ 1.93
BRD4O60885 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms