Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PRAMEF4O60810 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAMEF4O60810 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.85■□□□□ 0.61
PRAMEF4O60810 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PRAMEF4O60810 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.84■□□□□ 0.61
PRAMEF4O60810 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEF4O60810 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEF4O60810 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PRAMEF4O60810 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.84■□□□□ 0.61
PRAMEF4O60810 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
PRAMEF4O60810 AP003097.1-201ENST00000530657 1135 ntBASIC18.84■□□□□ 0.61
PRAMEF4O60810 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEF4O60810 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEF4O60810 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.84■□□□□ 0.61
PRAMEF4O60810 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PRAMEF4O60810 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEF4O60810 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF4O60810 AL032819.2-201ENST00000624543 2162 ntBASIC18.83■□□□□ 0.61
PRAMEF4O60810 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PRAMEF4O60810 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF4O60810 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF4O60810 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF4O60810 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.83■□□□□ 0.61
PRAMEF4O60810 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PRAMEF4O60810 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF4O60810 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF4O60810 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF4O60810 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEF4O60810 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
PRAMEF4O60810 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEF4O60810 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.83■□□□□ 0.6
PRAMEF4O60810 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF4O60810 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF4O60810 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF4O60810 AP006587.1-201ENST00000534129 1502 ntBASIC18.83■□□□□ 0.6
PRAMEF4O60810 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PRAMEF4O60810 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF4O60810 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF4O60810 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF4O60810 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF4O60810 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms