Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PHGDHO43175 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHGDHO43175 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PHGDHO43175 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHGDHO43175 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHGDHO43175 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.48■□□□□ 0.71
PHGDHO43175 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHGDHO43175 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PHGDHO43175 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.48■□□□□ 0.71
PHGDHO43175 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHGDHO43175 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
PHGDHO43175 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.48■□□□□ 0.71
PHGDHO43175 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.48■□□□□ 0.71
PHGDHO43175 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.48■□□□□ 0.71
PHGDHO43175 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.48■□□□□ 0.71
PHGDHO43175 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PHGDHO43175 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHGDHO43175 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.48■□□□□ 0.71
PHGDHO43175 AC004408.2-201ENST00000623613 2777 ntBASIC19.48■□□□□ 0.71
PHGDHO43175 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHGDHO43175 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PHGDHO43175 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.47■□□□□ 0.71
PHGDHO43175 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PHGDHO43175 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHGDHO43175 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.47■□□□□ 0.71
PHGDHO43175 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.47■□□□□ 0.71
PHGDHO43175 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHGDHO43175 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.47■□□□□ 0.71
PHGDHO43175 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.47■□□□□ 0.71
PHGDHO43175 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.47■□□□□ 0.71
PHGDHO43175 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.47■□□□□ 0.71
PHGDHO43175 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.47■□□□□ 0.71
PHGDHO43175 AC116351.2-201ENST00000606540 1585 ntBASIC19.47■□□□□ 0.71
PHGDHO43175 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHGDHO43175 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHGDHO43175 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.47■□□□□ 0.71
PHGDHO43175 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PHGDHO43175 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.46■□□□□ 0.71
PHGDHO43175 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.46■□□□□ 0.71
PHGDHO43175 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PHGDHO43175 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PHGDHO43175 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.46■□□□□ 0.71
PHGDHO43175 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.46■□□□□ 0.71
PHGDHO43175 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.46■□□□□ 0.71
PHGDHO43175 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.46■□□□□ 0.71
PHGDHO43175 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.46■□□□□ 0.71
PHGDHO43175 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PHGDHO43175 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
PHGDHO43175 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PHGDHO43175 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHGDHO43175 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHGDHO43175 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHGDHO43175 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHGDHO43175 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHGDHO43175 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PHGDHO43175 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHGDHO43175 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.45■□□□□ 0.7
PHGDHO43175 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.45■□□□□ 0.7
PHGDHO43175 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PHGDHO43175 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PHGDHO43175 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.45■□□□□ 0.7
PHGDHO43175 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHGDHO43175 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHGDHO43175 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.45■□□□□ 0.7
PHGDHO43175 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PHGDHO43175 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHGDHO43175 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.45■□□□□ 0.7
PHGDHO43175 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.45■□□□□ 0.7
PHGDHO43175 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.44■□□□□ 0.7
PHGDHO43175 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHGDHO43175 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.44■□□□□ 0.7
PHGDHO43175 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.44■□□□□ 0.7
PHGDHO43175 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.44■□□□□ 0.7
PHGDHO43175 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.44■□□□□ 0.7
PHGDHO43175 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.44■□□□□ 0.7
PHGDHO43175 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.44■□□□□ 0.7
PHGDHO43175 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PHGDHO43175 MIR935-201ENST00000401179 91 ntBASIC19.44■□□□□ 0.7
PHGDHO43175 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.44■□□□□ 0.7
PHGDHO43175 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.44■□□□□ 0.7
PHGDHO43175 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.44■□□□□ 0.7
PHGDHO43175 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHGDHO43175 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHGDHO43175 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHGDHO43175 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PHGDHO43175 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHGDHO43175 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms