Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIC1O00299 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.46■□□□□ 0.55
CLIC1O00299 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 AC018553.1-201ENST00000616682 1458 ntBASIC18.46■□□□□ 0.55
CLIC1O00299 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CLIC1O00299 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CLIC1O00299 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.46■□□□□ 0.55
CLIC1O00299 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
CLIC1O00299 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC1O00299 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC1O00299 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.46■□□□□ 0.54
CLIC1O00299 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.45■□□□□ 0.54
CLIC1O00299 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLIC1O00299 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.45■□□□□ 0.54
CLIC1O00299 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.45■□□□□ 0.54
CLIC1O00299 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.45■□□□□ 0.54
CLIC1O00299 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.45■□□□□ 0.54
CLIC1O00299 LSM12P1-201ENST00000411836 588 ntBASIC18.45■□□□□ 0.54
CLIC1O00299 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.45■□□□□ 0.54
CLIC1O00299 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 RARRES2P6-201ENST00000567333 442 ntBASIC18.45■□□□□ 0.54
CLIC1O00299 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.45■□□□□ 0.54
CLIC1O00299 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CLIC1O00299 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLIC1O00299 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLIC1O00299 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.45■□□□□ 0.54
CLIC1O00299 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.45■□□□□ 0.54
CLIC1O00299 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC1O00299 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.44■□□□□ 0.54
CLIC1O00299 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CLIC1O00299 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
CLIC1O00299 AC116351.2-201ENST00000606540 1585 ntBASIC18.44■□□□□ 0.54
CLIC1O00299 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CLIC1O00299 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.44■□□□□ 0.54
CLIC1O00299 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.44■□□□□ 0.54
CLIC1O00299 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.44■□□□□ 0.54
CLIC1O00299 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.44■□□□□ 0.54
CLIC1O00299 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 AC005181.1-201ENST00000604782 1256 ntBASIC18.44■□□□□ 0.54
CLIC1O00299 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CLIC1O00299 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CLIC1O00299 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC1O00299 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.43■□□□□ 0.54
CLIC1O00299 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC1O00299 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC1O00299 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLIC1O00299 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.43■□□□□ 0.54
CLIC1O00299 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.43■□□□□ 0.54
CLIC1O00299 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.43■□□□□ 0.54
CLIC1O00299 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLIC1O00299 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC1O00299 GPX1P1-201ENST00000388829 606 ntBASIC18.43■□□□□ 0.54
CLIC1O00299 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms