Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA1A8K7I4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 TREX1-205ENST00000625293 1783 ntBASIC18.27■□□□□ 0.52
CLCA1A8K7I4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA1A8K7I4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.27■□□□□ 0.51
CLCA1A8K7I4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCA1A8K7I4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.27■□□□□ 0.51
CLCA1A8K7I4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLCA1A8K7I4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CLCA1A8K7I4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 Z82202.1-201ENST00000623446 1880 ntBASIC18.26■□□□□ 0.51
CLCA1A8K7I4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CLCA1A8K7I4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA1A8K7I4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCA1A8K7I4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA1A8K7I4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA1A8K7I4 AC093503.3-201ENST00000624917 2352 ntBASIC18.25■□□□□ 0.51
CLCA1A8K7I4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA1A8K7I4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA1A8K7I4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA1A8K7I4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLCA1A8K7I4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA1A8K7I4 ESRRAP1-201ENST00000400596 1257 ntBASIC18.25■□□□□ 0.51
CLCA1A8K7I4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA1A8K7I4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLCA1A8K7I4 AC060766.5-201ENST00000590539 871 ntBASIC18.25■□□□□ 0.51
CLCA1A8K7I4 AL356652.1-201ENST00000615962 565 ntBASIC18.25■□□□□ 0.51
CLCA1A8K7I4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms