Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 AP000889.1-201ENST00000530968 660 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 Z84480.1-201ENST00000605131 311 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC087203.2-201ENST00000526502 1587 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AL592429.1-201ENST00000403909 1473 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AL512504.2-201ENST00000445455 1909 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 AP003972.1-201ENST00000625192 5446 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 SND1-IT1-201ENST00000623342 2481 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 CCDC150P1-201ENST00000537123 2215 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 MIR135B-201ENST00000362189 97 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 RNU6-543P-201ENST00000362576 108 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 RNU6-379P-201ENST00000363813 104 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 RNU6-809P-201ENST00000384461 107 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 CNN3P1-201ENST00000401596 935 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 RN7SKP188-201ENST00000410789 317 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 FTOP1-201ENST00000419363 861 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 BLOC1S2P1-201ENST00000428431 301 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 RPL31P35-201ENST00000431058 377 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 RANP1-206ENST00000455094 651 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 AP003385.3-201ENST00000472498 287 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 AC099521.1-201ENST00000482557 334 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 AC008040.4-201ENST00000494834 768 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 Y_RNA.672-201ENST00000516289 104 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 RNU2-46P-201ENST00000517038 113 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 AP003467.2-201ENST00000520175 319 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 RGS5-218ENST00000526176 574 ntTSL 4 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 ZNF322P1-201ENST00000568013 1209 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 BNIP3P4-201ENST00000604946 565 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 AC005014.2-201ENST00000607795 599 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 MIR6798-201ENST00000612887 67 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 RNVU1-19-201ENST00000613023 167 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 AC015722.2-201ENST00000622210 551 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 AP006248.2-201ENST00000623309 592 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 AC010653.3-201ENST00000635332 232 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.24□□□□□ -1.09
LRCH3Q96II8 GTF2IP1-202ENST00000614592 2047 ntBASIC8.24□□□□□ -1.09
LRCH3Q96II8 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LRCH3Q96II8 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC8.23□□□□□ -1.09
LRCH3Q96II8 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms