RNA–Protein interactions for RNA: ENST00000517038.1

RNU2-46P-201, Transcript of RNA, U2 small nuclear 46, pseudogene, humanhuman

BASIC

Gene RNU2-46P, Length 113 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-46P-201ENST00000517038 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
RNU2-46P-201ENST00000517038 CHIC1Q5VXU3 224 aa19.01■□□□□ 0.63
RNU2-46P-201ENST00000517038 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
RNU2-46P-201ENST00000517038 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
RNU2-46P-201ENST00000517038 PLPPR3Q6T4P5 718 aa15.47■□□□□ 0.07
RNU2-46P-201ENST00000517038 FOXD1Q16676 465 aa15.34■□□□□ 0.05
RNU2-46P-201ENST00000517038 ADRA2BP18089 450 aa14.76□□□□□ -0.05
RNU2-46P-201ENST00000517038 PPP6R1Q9UPN7 881 aa14.75□□□□□ -0.05
RNU2-46P-201ENST00000517038 PIAS4Q8N2W9 510 aaPredicted RBP14.49□□□□□ -0.09
RNU2-46P-201ENST00000517038 MSH5O43196 834 aa14.18□□□□□ -0.14
RNU2-46P-201ENST00000517038 PPP4R3CPQ6ZMV5 832 aa13.63□□□□□ -0.23
RNU2-46P-201ENST00000517038 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
RNU2-46P-201ENST00000517038 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
RNU2-46P-201ENST00000517038 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
RNU2-46P-201ENST00000517038 KCNA4P22459 653 aa13.27□□□□□ -0.29
RNU2-46P-201ENST00000517038 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
RNU2-46P-201ENST00000517038 DMRT2Q9Y5R5 561 aa13.19□□□□□ -0.3
RNU2-46P-201ENST00000517038 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
RNU2-46P-201ENST00000517038 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
RNU2-46P-201ENST00000517038 HOXD11P31277 338 aaPredicted RBP12.91□□□□□ -0.34
RNU2-46P-201ENST00000517038 POTEDQ86YR6 584 aa12.9□□□□□ -0.34
RNU2-46P-201ENST00000517038 DCAF8L1A6NGE4 600 aa12.69□□□□□ -0.38
RNU2-46P-201ENST00000517038 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
RNU2-46P-201ENST00000517038 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
RNU2-46P-201ENST00000517038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.38□□□□□ -0.43
RNU2-46P-201ENST00000517038 SLC4A2P04920 1241 aa12.3□□□□□ -0.44
RNU2-46P-201ENST00000517038 EHMT2Q96KQ7 1210 aa12.29□□□□□ -0.44
RNU2-46P-201ENST00000517038 FOXD4L1Q9NU39 408 aa12.23□□□□□ -0.45
RNU2-46P-201ENST00000517038 ZBTB22O15209 634 aa12.16□□□□□ -0.46
RNU2-46P-201ENST00000517038 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
RNU2-46P-201ENST00000517038 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
RNU2-46P-201ENST00000517038 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
RNU2-46P-201ENST00000517038 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
RNU2-46P-201ENST00000517038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
RNU2-46P-201ENST00000517038 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
RNU2-46P-201ENST00000517038 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
RNU2-46P-201ENST00000517038 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
RNU2-46P-201ENST00000517038 APLP2Q06481 763 aa11.91□□□□□ -0.5
RNU2-46P-201ENST00000517038 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
RNU2-46P-201ENST00000517038 ATXN8OSP0DMR3 200 aa11.82□□□□□ -0.52
RNU2-46P-201ENST00000517038 CAPN15O75808 1086 aa11.78□□□□□ -0.52
RNU2-46P-201ENST00000517038 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
RNU2-46P-201ENST00000517038 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
RNU2-46P-201ENST00000517038 ATF5Q9Y2D1 282 aaPredicted RBP11.71□□□□□ -0.53
RNU2-46P-201ENST00000517038 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
RNU2-46P-201ENST00000517038 DSG3P32926 999 aa11.54□□□□□ -0.56
RNU2-46P-201ENST00000517038 ABCB7O75027 752 aa11.53□□□□□ -0.56
RNU2-46P-201ENST00000517038 POLA2Q14181 598 aa11.52□□□□□ -0.57
RNU2-46P-201ENST00000517038 ZBTB12Q9Y330 459 aaPredicted RBP11.34□□□□□ -0.59
RNU2-46P-201ENST00000517038 FBLN2P98095 1184 aa11.31□□□□□ -0.6
RNU2-46P-201ENST00000517038 MKRN4PQ13434 485 aaPredicted RBP11.2□□□□□ -0.62
RNU2-46P-201ENST00000517038 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
RNU2-46P-201ENST00000517038 RBM42Q9BTD8 480 aaKnown RBP11.04□□□□□ -0.64
RNU2-46P-201ENST00000517038 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
RNU2-46P-201ENST00000517038 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
RNU2-46P-201ENST00000517038 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
RNU2-46P-201ENST00000517038 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
RNU2-46P-201ENST00000517038 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
RNU2-46P-201ENST00000517038 FKBP8Q14318 412 aa10.99□□□□□ -0.65
RNU2-46P-201ENST00000517038 AKT1S1Q96B36 256 aa10.89□□□□□ -0.67
RNU2-46P-201ENST00000517038 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
RNU2-46P-201ENST00000517038 PABPN1Q86U42 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
RNU2-46P-201ENST00000517038 REM2Q8IYK8 340 aaPredicted RBP10.78□□□□□ -0.68
RNU2-46P-201ENST00000517038 PROM2Q8N271 834 aa10.75□□□□□ -0.69
RNU2-46P-201ENST00000517038 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
RNU2-46P-201ENST00000517038 STAG3Q9UJ98 1225 aa10.69□□□□□ -0.7
RNU2-46P-201ENST00000517038 CLEC11AQ9Y240 323 aa10.68□□□□□ -0.7
RNU2-46P-201ENST00000517038 FBXO3Q9UK99 471 aa10.65□□□□□ -0.7
RNU2-46P-201ENST00000517038 PITPNM1O00562 1244 aa10.63□□□□□ -0.71
RNU2-46P-201ENST00000517038 PRR29P0C7W0 189 aa10.59□□□□□ -0.71
RNU2-46P-201ENST00000517038 CHRDL2Q6WN34 429 aa10.56□□□□□ -0.72
RNU2-46P-201ENST00000517038 MIER1Q8N108 512 aa10.48□□□□□ -0.73
RNU2-46P-201ENST00000517038 PLEKHG5O94827 1062 aa10.46□□□□□ -0.73
RNU2-46P-201ENST00000517038 PLCD3Q8N3E9 789 aa10.46□□□□□ -0.73
RNU2-46P-201ENST00000517038 VASPP50552 380 aaPredicted RBP10.45□□□□□ -0.74
RNU2-46P-201ENST00000517038 FXR2P51116 673 aaKnown RBP eCLIP10.44□□□□□ -0.74
RNU2-46P-201ENST00000517038 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
RNU2-46P-201ENST00000517038 PRKAR2AP13861 404 aaKnown RBP10.4□□□□□ -0.74
RNU2-46P-201ENST00000517038 CREBZFQ9NS37 354 aa10.39□□□□□ -0.75
RNU2-46P-201ENST00000517038 CHADLQ6NUI6 762 aa10.37□□□□□ -0.75
RNU2-46P-201ENST00000517038 KLHL34Q8N239 644 aa10.36□□□□□ -0.75
RNU2-46P-201ENST00000517038 ZBTB47Q9UFB7 747 aaPredicted RBP10.34□□□□□ -0.75
RNU2-46P-201ENST00000517038 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
RNU2-46P-201ENST00000517038 FARP1Q9Y4F1 1045 aaPredicted RBP10.29□□□□□ -0.76
RNU2-46P-201ENST00000517038 NPM1P06748 294 aaKnown RBP eCLIP10.28□□□□□ -0.76
RNU2-46P-201ENST00000517038 MNX1P50219 401 aaPredicted RBP10.25□□□□□ -0.77
RNU2-46P-201ENST00000517038 POTEHQ6S545 545 aa10.24□□□□□ -0.77
RNU2-46P-201ENST00000517038 SPOCK2Q92563 424 aa10.23□□□□□ -0.77
RNU2-46P-201ENST00000517038 HAX1O00165 279 aa10.14□□□□□ -0.79
RNU2-46P-201ENST00000517038 NUBP1P53384 320 aa10.13□□□□□ -0.79
RNU2-46P-201ENST00000517038 PAK3O75914 559 aaPredicted RBP10.12□□□□□ -0.79
RNU2-46P-201ENST00000517038 DCAF8Q5TAQ9 597 aa10.12□□□□□ -0.79
RNU2-46P-201ENST00000517038 RASEFQ8IZ41 740 aa10.1□□□□□ -0.79
RNU2-46P-201ENST00000517038 FAM212AQ96EL1 285 aa10.1□□□□□ -0.79
RNU2-46P-201ENST00000517038 CD44P16070 742 aaKnown RBP10.09□□□□□ -0.79
RNU2-46P-201ENST00000517038 TSPYL2Q9H2G4 693 aaPredicted RBP10.09□□□□□ -0.79
RNU2-46P-201ENST00000517038 CIZ1Q9ULV3 898 aaPredicted RBP10.09□□□□□ -0.79
RNU2-46P-201ENST00000517038 C19orf67A6NJJ6 358 aa10.08□□□□□ -0.8
RNU2-46P-201ENST00000517038 GSE1Q14687 1217 aa10.08□□□□□ -0.8
RNU2-46P-201ENST00000517038 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms