RNA–Protein interactions for RNA: ENST00000304233.3

LINC00208-201, long intergenic non-protein coding RNA 208, humanhuman

TSL 2 BASIC

Gene LINC00208, Length 2,150 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00208-201ENST00000304233 NISCHQ9Y2I1 1504 aa16.42■□□□□ 0.22
LINC00208-201ENST00000304233 ABCC9O60706 1549 aa15.16■□□□□ 0.02
LINC00208-201ENST00000304233 DNAJC5BQ9UF47 199 aa14.91□□□□□ -0.02
LINC00208-201ENST00000304233 CCDC180Q9P1Z9 1646 aa14.54□□□□□ -0.08
LINC00208-201ENST00000304233 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
LINC00208-201ENST00000304233 RB1CC1Q8TDY2 1594 aa14.16□□□□□ -0.14
LINC00208-201ENST00000304233 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
LINC00208-201ENST00000304233 NACADO15069 1562 aa13.9□□□□□ -0.18
LINC00208-201ENST00000304233 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
LINC00208-201ENST00000304233 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
LINC00208-201ENST00000304233 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
LINC00208-201ENST00000304233 BICRAQ9NZM4 1560 aa13.78□□□□□ -0.2
LINC00208-201ENST00000304233 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
LINC00208-201ENST00000304233 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
LINC00208-201ENST00000304233 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
LINC00208-201ENST00000304233 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
LINC00208-201ENST00000304233 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
LINC00208-201ENST00000304233 EIF4G1Q04637 1599 aaKnown RBP13.49□□□□□ -0.25
LINC00208-201ENST00000304233 DCAF1Q9Y4B6 1507 aa13.47□□□□□ -0.25
LINC00208-201ENST00000304233 CHIC1Q5VXU3 224 aa13.43□□□□□ -0.26
LINC00208-201ENST00000304233 CUX2O14529 1486 aa13.35□□□□□ -0.27
LINC00208-201ENST00000304233 TRIM41Q8WV44 630 aa13.28□□□□□ -0.28
LINC00208-201ENST00000304233 SCRIBQ14160 1630 aa13.19□□□□□ -0.3
LINC00208-201ENST00000304233 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
LINC00208-201ENST00000304233 AEBP2Q6ZN18 517 aaPredicted RBP13.07□□□□□ -0.32
LINC00208-201ENST00000304233 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
LINC00208-201ENST00000304233 RSF1Q96T23 1441 aaPredicted RBP12.94□□□□□ -0.34
LINC00208-201ENST00000304233 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
LINC00208-201ENST00000304233 THOC2Q8NI27 1593 aaKnown RBP12.86□□□□□ -0.35
LINC00208-201ENST00000304233 NESP48681 1621 aa12.85□□□□□ -0.35
LINC00208-201ENST00000304233 MROH2BQ7Z745 1585 aa12.76□□□□□ -0.37
LINC00208-201ENST00000304233 LOC105371045A0A1W2PR82 267 aa12.73□□□□□ -0.37
LINC00208-201ENST00000304233 ATAD2BQ9ULI0 1458 aa12.71□□□□□ -0.37
LINC00208-201ENST00000304233 SMARCA2P51531 1590 aa12.7□□□□□ -0.38
LINC00208-201ENST00000304233 HMGXB3Q12766 1538 aa12.69□□□□□ -0.38
LINC00208-201ENST00000304233 WIZO95785 1651 aa12.68□□□□□ -0.38
LINC00208-201ENST00000304233 KIF21AQ7Z4S6 1674 aa12.66□□□□□ -0.38
LINC00208-201ENST00000304233 LAMC3Q9Y6N6 1575 aa12.66□□□□□ -0.38
LINC00208-201ENST00000304233 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
LINC00208-201ENST00000304233 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
LINC00208-201ENST00000304233 PDS5BQ9NTI5 1447 aa12.6□□□□□ -0.39
LINC00208-201ENST00000304233 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
LINC00208-201ENST00000304233 BAZ1BQ9UIG0 1483 aaKnown RBP12.54□□□□□ -0.4
LINC00208-201ENST00000304233 RIMBP3CA6NJZ7 1639 aa12.54□□□□□ -0.4
LINC00208-201ENST00000304233 RIMBP3BA6NNM3 1639 aa12.54□□□□□ -0.4
LINC00208-201ENST00000304233 RIMBP3Q9UFD9 1639 aa12.54□□□□□ -0.4
LINC00208-201ENST00000304233 FAM9AQ8IZU1 332 aaPredicted RBP12.53□□□□□ -0.4
LINC00208-201ENST00000304233 WDR62O43379 1518 aa12.53□□□□□ -0.4
LINC00208-201ENST00000304233 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
LINC00208-201ENST00000304233 SMARCA4P51532 1647 aa12.53□□□□□ -0.4
LINC00208-201ENST00000304233 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
LINC00208-201ENST00000304233 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
LINC00208-201ENST00000304233 CCDC88BA6NC98 1476 aa12.43□□□□□ -0.42
LINC00208-201ENST00000304233 ARHGEF11O15085 1522 aa12.43□□□□□ -0.42
LINC00208-201ENST00000304233 HRCP23327 699 aa12.43□□□□□ -0.42
LINC00208-201ENST00000304233 PEG3Q9GZU2 1588 aa12.43□□□□□ -0.42
LINC00208-201ENST00000304233 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
LINC00208-201ENST00000304233 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
LINC00208-201ENST00000304233 CYB5RLQ6IPT4 315 aa12.4□□□□□ -0.42
LINC00208-201ENST00000304233 TRIM26Q12899 539 aaPredicted RBP12.35□□□□□ -0.43
LINC00208-201ENST00000304233 CEP164Q9UPV0 1460 aa12.34□□□□□ -0.43
LINC00208-201ENST00000304233 ABCC8Q09428 1581 aa12.33□□□□□ -0.44
LINC00208-201ENST00000304233 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
LINC00208-201ENST00000304233 FANCD2Q9BXW9 1451 aa12.28□□□□□ -0.44
LINC00208-201ENST00000304233 ARAP1Q96P48 1450 aa12.27□□□□□ -0.45
LINC00208-201ENST00000304233 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
LINC00208-201ENST00000304233 PPARGC1BQ86YN6 1023 aaKnown RBP12.21□□□□□ -0.45
LINC00208-201ENST00000304233 SOGA1O94964 1423 aa12.21□□□□□ -0.46
LINC00208-201ENST00000304233 ZNF608Q9ULD9 1512 aaPredicted RBP12.18□□□□□ -0.46
LINC00208-201ENST00000304233 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
LINC00208-201ENST00000304233 WRNQ14191 1432 aaPredicted RBP eCLIP12.15□□□□□ -0.46
LINC00208-201ENST00000304233 CFTRP13569 1480 aa12.15□□□□□ -0.46
LINC00208-201ENST00000304233 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.47
LINC00208-201ENST00000304233 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
LINC00208-201ENST00000304233 IFT140Q96RY7 1462 aa12.13□□□□□ -0.47
LINC00208-201ENST00000304233 CHD1O14646 1710 aa12.11□□□□□ -0.47
LINC00208-201ENST00000304233 EEA1Q15075 1411 aa12.1□□□□□ -0.47
LINC00208-201ENST00000304233 SYNJ1O43426 1573 aa12.09□□□□□ -0.47
LINC00208-201ENST00000304233 EIF4G3O43432 1585 aaKnown RBP12.07□□□□□ -0.48
LINC00208-201ENST00000304233 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
LINC00208-201ENST00000304233 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
LINC00208-201ENST00000304233 CEP162Q5TB80 1403 aa12.06□□□□□ -0.48
LINC00208-201ENST00000304233 MYT1Q01538 1121 aa12.03□□□□□ -0.48
LINC00208-201ENST00000304233 DAXXQ9UER7 740 aaPredicted RBP12.02□□□□□ -0.48
LINC00208-201ENST00000304233 FBLN2P98095 1184 aa12.02□□□□□ -0.49
LINC00208-201ENST00000304233 GOLGA3Q08378 1498 aa12□□□□□ -0.49
LINC00208-201ENST00000304233 ZEB1P37275 1124 aaPredicted RBP11.99□□□□□ -0.49
LINC00208-201ENST00000304233 AQRO60306 1485 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00208-201ENST00000304233 TTBK1Q5TCY1 1321 aaPredicted RBP11.98□□□□□ -0.49
LINC00208-201ENST00000304233 TOPBP1Q92547 1522 aa11.97□□□□□ -0.49
LINC00208-201ENST00000304233 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
LINC00208-201ENST00000304233 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.49
LINC00208-201ENST00000304233 TOP2BQ02880 1626 aa11.95□□□□□ -0.5
LINC00208-201ENST00000304233 KIF21BO75037 1637 aa11.94□□□□□ -0.5
LINC00208-201ENST00000304233 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
LINC00208-201ENST00000304233 BIVM-ERCC5R4GMW8 1640 aa11.91□□□□□ -0.5
LINC00208-201ENST00000304233 RAPGEF2Q9Y4G8 1499 aa11.91□□□□□ -0.5
LINC00208-201ENST00000304233 KDM4FA0A1W2PPD8 638 aa11.9□□□□□ -0.5
LINC00208-201ENST00000304233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
LINC00208-201ENST00000304233 CUX1P39880 1505 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms