RNA–Protein interactions for RNA: ENST00000402934.5

LTBP1-201, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LTBP1, Length 4,948 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-201ENST00000402934 NISCHQ9Y2I1 1504 aa15.45■□□□□ 0.06
LTBP1-201ENST00000402934 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
LTBP1-201ENST00000402934 PELP1Q8IZL8 1130 aaKnown RBP13.87□□□□□ -0.19
LTBP1-201ENST00000402934 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.23
LTBP1-201ENST00000402934 SHROOM4Q9ULL8 1493 aa13.57□□□□□ -0.24
LTBP1-201ENST00000402934 APLP2Q06481 763 aa13.31□□□□□ -0.28
LTBP1-201ENST00000402934 CCER1Q8TC90 406 aaPredicted RBP13.23□□□□□ -0.29
LTBP1-201ENST00000402934 ERICH6Q7L0X2 663 aa13.17□□□□□ -0.3
LTBP1-201ENST00000402934 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
LTBP1-201ENST00000402934 FAM9AQ8IZU1 332 aaPredicted RBP13.13□□□□□ -0.31
LTBP1-201ENST00000402934 EHMT2Q96KQ7 1210 aa13.12□□□□□ -0.31
LTBP1-201ENST00000402934 MYT1Q01538 1121 aa13.1□□□□□ -0.31
LTBP1-201ENST00000402934 CCDC180Q9P1Z9 1646 aa13.08□□□□□ -0.32
LTBP1-201ENST00000402934 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
LTBP1-201ENST00000402934 PCGF6Q9BYE7 350 aa12.92□□□□□ -0.34
LTBP1-201ENST00000402934 ABCC9O60706 1549 aa12.92□□□□□ -0.34
LTBP1-201ENST00000402934 ZCCHC6Q5VYS8 1495 aaKnown RBP12.9□□□□□ -0.34
LTBP1-201ENST00000402934 NEFLP07196 543 aa12.88□□□□□ -0.35
LTBP1-201ENST00000402934 TTBK1Q5TCY1 1321 aaPredicted RBP12.75□□□□□ -0.37
LTBP1-201ENST00000402934 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
LTBP1-201ENST00000402934 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
LTBP1-201ENST00000402934 ATP1B4Q9UN42 357 aaPredicted RBP12.59□□□□□ -0.39
LTBP1-201ENST00000402934 RANGAP1P46060 587 aaPredicted RBP12.56□□□□□ -0.4
LTBP1-201ENST00000402934 YTHDC1Q96MU7 727 aaKnown RBP12.56□□□□□ -0.4
LTBP1-201ENST00000402934 UBTFP17480 764 aaKnown RBP12.56□□□□□ -0.4
LTBP1-201ENST00000402934 DCAF1Q9Y4B6 1507 aa12.53□□□□□ -0.4
LTBP1-201ENST00000402934 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
LTBP1-201ENST00000402934 PABPN1Q86U42 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
LTBP1-201ENST00000402934 CHIC1Q5VXU3 224 aa12.45□□□□□ -0.42
LTBP1-201ENST00000402934 NACADO15069 1562 aa12.45□□□□□ -0.42
LTBP1-201ENST00000402934 RB1CC1Q8TDY2 1594 aa12.42□□□□□ -0.42
LTBP1-201ENST00000402934 TRIM26Q12899 539 aaPredicted RBP12.4□□□□□ -0.43
LTBP1-201ENST00000402934 HRCP23327 699 aa12.31□□□□□ -0.44
LTBP1-201ENST00000402934 RTL5Q5HYW3 569 aaPredicted RBP12.31□□□□□ -0.44
LTBP1-201ENST00000402934 MYO15BQ96JP2 1530 aa12.28□□□□□ -0.44
LTBP1-201ENST00000402934 ZNF316A6NFI3 1004 aaPredicted RBP12.23□□□□□ -0.45
LTBP1-201ENST00000402934 POLR3GLQ9BT43 218 aa12.23□□□□□ -0.45
LTBP1-201ENST00000402934 RSF1Q96T23 1441 aaPredicted RBP12.18□□□□□ -0.46
LTBP1-201ENST00000402934 CLSPNQ9HAW4 1339 aa12.18□□□□□ -0.46
LTBP1-201ENST00000402934 PPARGC1BQ86YN6 1023 aaKnown RBP12.17□□□□□ -0.46
LTBP1-201ENST00000402934 MYT1LQ9UL68 1186 aa12.17□□□□□ -0.46
LTBP1-201ENST00000402934 LOC105371045A0A1W2PR82 267 aa12.15□□□□□ -0.46
LTBP1-201ENST00000402934 ITGAEP38570 1179 aa12.14□□□□□ -0.47
LTBP1-201ENST00000402934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.13□□□□□ -0.47
LTBP1-201ENST00000402934 HNRNPUL2Q1KMD3 747 aaKnown RBP12.13□□□□□ -0.47
LTBP1-201ENST00000402934 DIEXFQ68CQ4 756 aaKnown RBP12.06□□□□□ -0.48
LTBP1-201ENST00000402934 CECR2Q9BXF3 1484 aa12.04□□□□□ -0.48
LTBP1-201ENST00000402934 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
LTBP1-201ENST00000402934 CNGB1Q14028 1251 aaPredicted RBP12.02□□□□□ -0.49
LTBP1-201ENST00000402934 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
LTBP1-201ENST00000402934 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
LTBP1-201ENST00000402934 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
LTBP1-201ENST00000402934 MROH2BQ7Z745 1585 aa11.94□□□□□ -0.5
LTBP1-201ENST00000402934 ANP32CO43423 234 aa11.9□□□□□ -0.5
LTBP1-201ENST00000402934 BAZ1BQ9UIG0 1483 aaKnown RBP11.89□□□□□ -0.51
LTBP1-201ENST00000402934 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
LTBP1-201ENST00000402934 TRIM52Q96A61 297 aa11.84□□□□□ -0.51
LTBP1-201ENST00000402934 GTF3C3Q9Y5Q9 886 aa11.84□□□□□ -0.51
LTBP1-201ENST00000402934 FAM50AQ14320 339 aaKnown RBP11.83□□□□□ -0.52
LTBP1-201ENST00000402934 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
LTBP1-201ENST00000402934 BCANQ96GW7 911 aa11.81□□□□□ -0.52
LTBP1-201ENST00000402934 NEFMP07197 916 aa11.79□□□□□ -0.52
LTBP1-201ENST00000402934 CANXP27824 592 aaKnown RBP11.78□□□□□ -0.52
LTBP1-201ENST00000402934 WIZO95785 1651 aa11.77□□□□□ -0.52
LTBP1-201ENST00000402934 NEUROD1Q13562 356 aa11.77□□□□□ -0.53
LTBP1-201ENST00000402934 SMARCA2P51531 1590 aa11.77□□□□□ -0.53
LTBP1-201ENST00000402934 ANP32BQ92688 251 aaKnown RBP11.77□□□□□ -0.53
LTBP1-201ENST00000402934 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
LTBP1-201ENST00000402934 CCDC88BA6NC98 1476 aa11.75□□□□□ -0.53
LTBP1-201ENST00000402934 SMARCA4P51532 1647 aa11.75□□□□□ -0.53
LTBP1-201ENST00000402934 WRNQ14191 1432 aaPredicted RBP eCLIP11.73□□□□□ -0.53
LTBP1-201ENST00000402934 GLIPR1L2Q4G1C9 344 aa11.72□□□□□ -0.53
LTBP1-201ENST00000402934 EEA1Q15075 1411 aa11.7□□□□□ -0.54
LTBP1-201ENST00000402934 ZNF326Q5BKZ1 582 aaKnown RBP11.69□□□□□ -0.54
LTBP1-201ENST00000402934 ATAD2BQ9ULI0 1458 aa11.68□□□□□ -0.54
LTBP1-201ENST00000402934 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
LTBP1-201ENST00000402934 EIF5BO60841 1220 aaKnown RBP11.65□□□□□ -0.54
LTBP1-201ENST00000402934 UPF2Q9HAU5 1272 aaKnown RBP11.64□□□□□ -0.55
LTBP1-201ENST00000402934 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
LTBP1-201ENST00000402934 HSP90AA1P07900 732 aaKnown RBP11.62□□□□□ -0.55
LTBP1-201ENST00000402934 NPM2Q86SE8 214 aaKnown RBP11.58□□□□□ -0.56
LTBP1-201ENST00000402934 BCL11AQ9H165 835 aa11.58□□□□□ -0.56
LTBP1-201ENST00000402934 GOLGA3Q08378 1498 aa11.58□□□□□ -0.56
LTBP1-201ENST00000402934 ABCC8Q09428 1581 aa11.56□□□□□ -0.56
LTBP1-201ENST00000402934 KIF27Q86VH2 1401 aa11.55□□□□□ -0.56
LTBP1-201ENST00000402934 TNIKQ9UKE5 1360 aa11.53□□□□□ -0.56
LTBP1-201ENST00000402934 CEP164Q9UPV0 1460 aa11.53□□□□□ -0.56
LTBP1-201ENST00000402934 SOGA1O94964 1423 aa11.52□□□□□ -0.56
LTBP1-201ENST00000402934 FBLN2P98095 1184 aa11.52□□□□□ -0.57
LTBP1-201ENST00000402934 P3H3Q8IVL6 736 aa11.52□□□□□ -0.57
LTBP1-201ENST00000402934 BICRAQ9NZM4 1560 aa11.51□□□□□ -0.57
LTBP1-201ENST00000402934 CLIP1P30622 1438 aa11.51□□□□□ -0.57
LTBP1-201ENST00000402934 CEP162Q5TB80 1403 aa11.51□□□□□ -0.57
LTBP1-201ENST00000402934 FKBP8Q14318 412 aa11.5□□□□□ -0.57
LTBP1-201ENST00000402934 NCAPD3P42695 1498 aa11.5□□□□□ -0.57
LTBP1-201ENST00000402934 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.5□□□□□ -0.57
LTBP1-201ENST00000402934 EIF4G1Q04637 1599 aaKnown RBP11.49□□□□□ -0.57
LTBP1-201ENST00000402934 CADPSQ9ULU8 1353 aa11.49□□□□□ -0.57
LTBP1-201ENST00000402934 HNRNPUQ00839 825 aaKnown RBP eCLIP11.46□□□□□ -0.58
LTBP1-201ENST00000402934 TONSLQ96HA7 1378 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms