RNA–Protein interactions for RNA: ENST00000579475.7

NOTCH2-206, Transcript of notch 2, humanhuman

TSL 1 (best) BASIC

Gene NOTCH2, Length 2,954 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-206ENST00000579475 NISCHQ9Y2I1 1504 aa16.12■□□□□ 0.17
NOTCH2-206ENST00000579475 HRCP23327 699 aa13.86□□□□□ -0.19
NOTCH2-206ENST00000579475 SHROOM4Q9ULL8 1493 aa13.82□□□□□ -0.2
NOTCH2-206ENST00000579475 SUPT5HO00267 1087 aaKnown RBP13.75□□□□□ -0.21
NOTCH2-206ENST00000579475 ZCCHC6Q5VYS8 1495 aaKnown RBP13.72□□□□□ -0.21
NOTCH2-206ENST00000579475 MYO15BQ96JP2 1530 aa13.62□□□□□ -0.23
NOTCH2-206ENST00000579475 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
NOTCH2-206ENST00000579475 CHIC1Q5VXU3 224 aa13.61□□□□□ -0.23
NOTCH2-206ENST00000579475 DCAF1Q9Y4B6 1507 aa13.52□□□□□ -0.24
NOTCH2-206ENST00000579475 PCGF6Q9BYE7 350 aa13.51□□□□□ -0.25
NOTCH2-206ENST00000579475 PPARGC1BQ86YN6 1023 aaKnown RBP13.46□□□□□ -0.26
NOTCH2-206ENST00000579475 PELP1Q8IZL8 1130 aaKnown RBP13.33□□□□□ -0.28
NOTCH2-206ENST00000579475 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
NOTCH2-206ENST00000579475 ZEB1P37275 1124 aaPredicted RBP13.23□□□□□ -0.29
NOTCH2-206ENST00000579475 LOC105371045A0A1W2PR82 267 aa13.14□□□□□ -0.31
NOTCH2-206ENST00000579475 DCAF8L2P0C7V8 631 aa13.07□□□□□ -0.32
NOTCH2-206ENST00000579475 ABCC9O60706 1549 aa13.02□□□□□ -0.32
NOTCH2-206ENST00000579475 SCAF1Q9H7N4 1312 aaKnown RBP12.99□□□□□ -0.33
NOTCH2-206ENST00000579475 RSF1Q96T23 1441 aaPredicted RBP12.86□□□□□ -0.35
NOTCH2-206ENST00000579475 MYT1Q01538 1121 aa12.85□□□□□ -0.35
NOTCH2-206ENST00000579475 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
NOTCH2-206ENST00000579475 RB1CC1Q8TDY2 1594 aa12.84□□□□□ -0.35
NOTCH2-206ENST00000579475 ACIN1Q9UKV3 1341 aaKnown RBP12.75□□□□□ -0.37
NOTCH2-206ENST00000579475 SCRIBQ14160 1630 aa12.68□□□□□ -0.38
NOTCH2-206ENST00000579475 CENPBP07199 599 aaPredicted RBP12.68□□□□□ -0.38
NOTCH2-206ENST00000579475 FAM9AQ8IZU1 332 aaPredicted RBP12.65□□□□□ -0.38
NOTCH2-206ENST00000579475 NEUROD1Q13562 356 aa12.64□□□□□ -0.39
NOTCH2-206ENST00000579475 CCER1Q8TC90 406 aaPredicted RBP12.61□□□□□ -0.39
NOTCH2-206ENST00000579475 DIEXFQ68CQ4 756 aaKnown RBP12.59□□□□□ -0.39
NOTCH2-206ENST00000579475 WRNQ14191 1432 aaPredicted RBP eCLIP12.56□□□□□ -0.4
NOTCH2-206ENST00000579475 GTF3C3Q9Y5Q9 886 aa12.56□□□□□ -0.4
NOTCH2-206ENST00000579475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.56□□□□□ -0.4
NOTCH2-206ENST00000579475 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
NOTCH2-206ENST00000579475 EIF4G1Q04637 1599 aaKnown RBP12.5□□□□□ -0.41
NOTCH2-206ENST00000579475 MROH2BQ7Z745 1585 aa12.49□□□□□ -0.41
NOTCH2-206ENST00000579475 NACADO15069 1562 aa12.48□□□□□ -0.41
NOTCH2-206ENST00000579475 BAZ1AQ9NRL2 1556 aaPredicted RBP12.48□□□□□ -0.41
NOTCH2-206ENST00000579475 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.41
NOTCH2-206ENST00000579475 WIZO95785 1651 aa12.45□□□□□ -0.42
NOTCH2-206ENST00000579475 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
NOTCH2-206ENST00000579475 CEP162Q5TB80 1403 aa12.39□□□□□ -0.43
NOTCH2-206ENST00000579475 TNIKQ9UKE5 1360 aa12.39□□□□□ -0.43
NOTCH2-206ENST00000579475 EEA1Q15075 1411 aa12.39□□□□□ -0.43
NOTCH2-206ENST00000579475 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
NOTCH2-206ENST00000579475 CCDC88BA6NC98 1476 aa12.3□□□□□ -0.44
NOTCH2-206ENST00000579475 CLSPNQ9HAW4 1339 aa12.29□□□□□ -0.44
NOTCH2-206ENST00000579475 ABCC8Q09428 1581 aa12.27□□□□□ -0.45
NOTCH2-206ENST00000579475 GOLGA3Q08378 1498 aa12.25□□□□□ -0.45
NOTCH2-206ENST00000579475 YTHDC1Q96MU7 727 aaKnown RBP12.25□□□□□ -0.45
NOTCH2-206ENST00000579475 SMARCA2P51531 1590 aa12.24□□□□□ -0.45
NOTCH2-206ENST00000579475 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
NOTCH2-206ENST00000579475 SOGA1O94964 1423 aa12.22□□□□□ -0.45
NOTCH2-206ENST00000579475 TTBK1Q5TCY1 1321 aaPredicted RBP12.22□□□□□ -0.45
NOTCH2-206ENST00000579475 MIER1Q8N108 512 aa12.22□□□□□ -0.45
NOTCH2-206ENST00000579475 SMARCA4P51532 1647 aa12.2□□□□□ -0.46
NOTCH2-206ENST00000579475 UBTFP17480 764 aaKnown RBP12.18□□□□□ -0.46
NOTCH2-206ENST00000579475 KIF21BO75037 1637 aa12.17□□□□□ -0.46
NOTCH2-206ENST00000579475 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.46
NOTCH2-206ENST00000579475 RUSC2Q8N2Y8 1516 aa12.12□□□□□ -0.47
NOTCH2-206ENST00000579475 VPS8Q8N3P4 1428 aa12.12□□□□□ -0.47
NOTCH2-206ENST00000579475 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
NOTCH2-206ENST00000579475 CLIP1P30622 1438 aa12.09□□□□□ -0.47
NOTCH2-206ENST00000579475 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
NOTCH2-206ENST00000579475 APLP2Q06481 763 aa12.05□□□□□ -0.48
NOTCH2-206ENST00000579475 SUPT16HQ9Y5B9 1047 aaKnown RBP12.04□□□□□ -0.48
NOTCH2-206ENST00000579475 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
NOTCH2-206ENST00000579475 DHX57Q6P158 1386 aaKnown RBP11.99□□□□□ -0.49
NOTCH2-206ENST00000579475 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
NOTCH2-206ENST00000579475 UNC13AQ9UPW8 1703 aa11.96□□□□□ -0.49
NOTCH2-206ENST00000579475 ANP32EQ9BTT0 268 aa11.95□□□□□ -0.5
NOTCH2-206ENST00000579475 CUX2O14529 1486 aa11.94□□□□□ -0.5
NOTCH2-206ENST00000579475 RAPGEF2Q9Y4G8 1499 aa11.94□□□□□ -0.5
NOTCH2-206ENST00000579475 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
NOTCH2-206ENST00000579475 ERICH3Q5RHP9 1530 aa11.92□□□□□ -0.5
NOTCH2-206ENST00000579475 RRBP1Q9P2E9 1410 aaKnown RBP11.91□□□□□ -0.5
NOTCH2-206ENST00000579475 TOP2BQ02880 1626 aa11.87□□□□□ -0.51
NOTCH2-206ENST00000579475 BCL11AQ9H165 835 aa11.85□□□□□ -0.51
NOTCH2-206ENST00000579475 ARAP1Q96P48 1450 aa11.85□□□□□ -0.51
NOTCH2-206ENST00000579475 PRXQ9BXM0 1461 aa11.84□□□□□ -0.51
NOTCH2-206ENST00000579475 BIVM-ERCC5R4GMW8 1640 aa11.84□□□□□ -0.51
NOTCH2-206ENST00000579475 CCNB3Q8WWL7 1395 aa11.8□□□□□ -0.52
NOTCH2-206ENST00000579475 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
NOTCH2-206ENST00000579475 ATAD2BQ9ULI0 1458 aa11.78□□□□□ -0.52
NOTCH2-206ENST00000579475 KANK4Q5T7N3 995 aaPredicted RBP11.76□□□□□ -0.53
NOTCH2-206ENST00000579475 MAP3K1Q13233 1512 aa11.75□□□□□ -0.53
NOTCH2-206ENST00000579475 TIMELESSQ9UNS1 1208 aa11.74□□□□□ -0.53
NOTCH2-206ENST00000579475 MAPKBP1O60336 1514 aa11.74□□□□□ -0.53
NOTCH2-206ENST00000579475 NEFLP07196 543 aa11.73□□□□□ -0.53
NOTCH2-206ENST00000579475 CCER2I3L3R5 266 aa11.71□□□□□ -0.53
NOTCH2-206ENST00000579475 FKBP8Q14318 412 aa11.71□□□□□ -0.53
NOTCH2-206ENST00000579475 RAB3GAP2Q9H2M9 1393 aa11.71□□□□□ -0.53
NOTCH2-206ENST00000579475 RANGAP1P46060 587 aaPredicted RBP11.71□□□□□ -0.54
NOTCH2-206ENST00000579475 BCANQ96GW7 911 aa11.71□□□□□ -0.54
NOTCH2-206ENST00000579475 KCNH8Q96L42 1107 aa11.7□□□□□ -0.54
NOTCH2-206ENST00000579475 KIF27Q86VH2 1401 aa11.7□□□□□ -0.54
NOTCH2-206ENST00000579475 SETD5Q9C0A6 1442 aa11.69□□□□□ -0.54
NOTCH2-206ENST00000579475 ARHGAP35Q9NRY4 1499 aa11.68□□□□□ -0.54
NOTCH2-206ENST00000579475 RBM19Q9Y4C8 960 aaKnown RBP11.68□□□□□ -0.54
NOTCH2-206ENST00000579475 TIAM1Q13009 1591 aa11.66□□□□□ -0.54
NOTCH2-206ENST00000579475 PPP1R15AO75807 674 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms