RNA–Protein interactions for RNA: ENST00000418533.6

LTBP1-207, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene LTBP1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-207ENST00000418533 NISCHQ9Y2I1 1504 aa15.1■□□□□ 0.01
LTBP1-207ENST00000418533 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
LTBP1-207ENST00000418533 FAM9AQ8IZU1 332 aaPredicted RBP14.09□□□□□ -0.15
LTBP1-207ENST00000418533 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
LTBP1-207ENST00000418533 MYT1Q01538 1121 aa13.81□□□□□ -0.2
LTBP1-207ENST00000418533 SHROOM4Q9ULL8 1493 aa13.57□□□□□ -0.24
LTBP1-207ENST00000418533 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
LTBP1-207ENST00000418533 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
LTBP1-207ENST00000418533 ZEB1P37275 1124 aaPredicted RBP13.3□□□□□ -0.28
LTBP1-207ENST00000418533 PCGF6Q9BYE7 350 aa13.23□□□□□ -0.29
LTBP1-207ENST00000418533 CCER1Q8TC90 406 aaPredicted RBP13.07□□□□□ -0.32
LTBP1-207ENST00000418533 ERICH6Q7L0X2 663 aa13.06□□□□□ -0.32
LTBP1-207ENST00000418533 HRCP23327 699 aa13.02□□□□□ -0.33
LTBP1-207ENST00000418533 ABCC9O60706 1549 aa12.89□□□□□ -0.35
LTBP1-207ENST00000418533 APLP2Q06481 763 aa12.87□□□□□ -0.35
LTBP1-207ENST00000418533 CCDC180Q9P1Z9 1646 aa12.82□□□□□ -0.36
LTBP1-207ENST00000418533 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.37
LTBP1-207ENST00000418533 MYT1LQ9UL68 1186 aa12.76□□□□□ -0.37
LTBP1-207ENST00000418533 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
LTBP1-207ENST00000418533 NEFLP07196 543 aa12.75□□□□□ -0.37
LTBP1-207ENST00000418533 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
LTBP1-207ENST00000418533 YTHDC1Q96MU7 727 aaKnown RBP12.66□□□□□ -0.38
LTBP1-207ENST00000418533 TTBK1Q5TCY1 1321 aaPredicted RBP12.63□□□□□ -0.39
LTBP1-207ENST00000418533 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
LTBP1-207ENST00000418533 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
LTBP1-207ENST00000418533 UBTFP17480 764 aaKnown RBP12.51□□□□□ -0.41
LTBP1-207ENST00000418533 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
LTBP1-207ENST00000418533 PPARGC1BQ86YN6 1023 aaKnown RBP12.5□□□□□ -0.41
LTBP1-207ENST00000418533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.46□□□□□ -0.41
LTBP1-207ENST00000418533 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
LTBP1-207ENST00000418533 AEBP2Q6ZN18 517 aaPredicted RBP12.46□□□□□ -0.42
LTBP1-207ENST00000418533 ESF1Q9H501 851 aaKnown RBP12.44□□□□□ -0.42
LTBP1-207ENST00000418533 ATP1B4Q9UN42 357 aaPredicted RBP12.43□□□□□ -0.42
LTBP1-207ENST00000418533 RANGAP1P46060 587 aaPredicted RBP12.41□□□□□ -0.42
LTBP1-207ENST00000418533 RB1CC1Q8TDY2 1594 aa12.4□□□□□ -0.42
LTBP1-207ENST00000418533 DIEXFQ68CQ4 756 aaKnown RBP12.39□□□□□ -0.43
LTBP1-207ENST00000418533 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
LTBP1-207ENST00000418533 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
LTBP1-207ENST00000418533 FBLN2P98095 1184 aa12.34□□□□□ -0.43
LTBP1-207ENST00000418533 NACADO15069 1562 aa12.33□□□□□ -0.44
LTBP1-207ENST00000418533 RTL5Q5HYW3 569 aaPredicted RBP12.33□□□□□ -0.44
LTBP1-207ENST00000418533 CHIC1Q5VXU3 224 aa12.31□□□□□ -0.44
LTBP1-207ENST00000418533 DAXXQ9UER7 740 aaPredicted RBP12.31□□□□□ -0.44
LTBP1-207ENST00000418533 ACIN1Q9UKV3 1341 aaKnown RBP12.31□□□□□ -0.44
LTBP1-207ENST00000418533 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.46
LTBP1-207ENST00000418533 DCAF1Q9Y4B6 1507 aa12.2□□□□□ -0.46
LTBP1-207ENST00000418533 LOC105371045A0A1W2PR82 267 aa12.19□□□□□ -0.46
LTBP1-207ENST00000418533 CLSPNQ9HAW4 1339 aa12.19□□□□□ -0.46
LTBP1-207ENST00000418533 ERCC6Q03468 1493 aa12.09□□□□□ -0.47
LTBP1-207ENST00000418533 CDK11AQ9UQ88 783 aaPredicted RBP12.08□□□□□ -0.47
LTBP1-207ENST00000418533 ZNF316A6NFI3 1004 aaPredicted RBP12.06□□□□□ -0.48
LTBP1-207ENST00000418533 BCANQ96GW7 911 aa12.04□□□□□ -0.48
LTBP1-207ENST00000418533 SCAF1Q9H7N4 1312 aaKnown RBP12.02□□□□□ -0.48
LTBP1-207ENST00000418533 FOXD1Q16676 465 aa12.02□□□□□ -0.49
LTBP1-207ENST00000418533 CHMP7Q8WUX9 453 aaPredicted RBP11.97□□□□□ -0.49
LTBP1-207ENST00000418533 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.49
LTBP1-207ENST00000418533 GLIPR1L2Q4G1C9 344 aa11.94□□□□□ -0.5
LTBP1-207ENST00000418533 NEUROD1Q13562 356 aa11.93□□□□□ -0.5
LTBP1-207ENST00000418533 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
LTBP1-207ENST00000418533 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
LTBP1-207ENST00000418533 CSRNP3Q8WYN3 585 aa11.9□□□□□ -0.5
LTBP1-207ENST00000418533 ANP32AP39687 249 aaKnown RBP11.89□□□□□ -0.51
LTBP1-207ENST00000418533 STAG3Q9UJ98 1225 aa11.88□□□□□ -0.51
LTBP1-207ENST00000418533 ITGAEP38570 1179 aa11.88□□□□□ -0.51
LTBP1-207ENST00000418533 DCAF8L1A6NGE4 600 aa11.88□□□□□ -0.51
LTBP1-207ENST00000418533 RSF1Q96T23 1441 aaPredicted RBP11.88□□□□□ -0.51
LTBP1-207ENST00000418533 ANP32CO43423 234 aa11.87□□□□□ -0.51
LTBP1-207ENST00000418533 EIF5BO60841 1220 aaKnown RBP11.84□□□□□ -0.51
LTBP1-207ENST00000418533 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
LTBP1-207ENST00000418533 ARID4BQ4LE39 1312 aaPredicted RBP11.83□□□□□ -0.52
LTBP1-207ENST00000418533 PLPPR3Q6T4P5 718 aa11.8□□□□□ -0.52
LTBP1-207ENST00000418533 FAM50AQ14320 339 aaKnown RBP11.79□□□□□ -0.52
LTBP1-207ENST00000418533 POLR3GLQ9BT43 218 aa11.77□□□□□ -0.53
LTBP1-207ENST00000418533 FKBP8Q14318 412 aa11.76□□□□□ -0.53
LTBP1-207ENST00000418533 EEA1Q15075 1411 aa11.76□□□□□ -0.53
LTBP1-207ENST00000418533 SMARCA2P51531 1590 aa11.75□□□□□ -0.53
LTBP1-207ENST00000418533 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
LTBP1-207ENST00000418533 SLC4A1APQ9BWU0 796 aaKnown RBP11.69□□□□□ -0.54
LTBP1-207ENST00000418533 BCL11AQ9H165 835 aa11.68□□□□□ -0.54
LTBP1-207ENST00000418533 TRIM52Q96A61 297 aa11.68□□□□□ -0.54
LTBP1-207ENST00000418533 CECR2Q9BXF3 1484 aa11.66□□□□□ -0.54
LTBP1-207ENST00000418533 C14orf37Q86TY3 774 aa11.66□□□□□ -0.54
LTBP1-207ENST00000418533 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
LTBP1-207ENST00000418533 P3H3Q8IVL6 736 aa11.65□□□□□ -0.54
LTBP1-207ENST00000418533 HAP1P54257 671 aaPredicted RBP11.64□□□□□ -0.55
LTBP1-207ENST00000418533 CNGB1Q14028 1251 aaPredicted RBP11.63□□□□□ -0.55
LTBP1-207ENST00000418533 KIF27Q86VH2 1401 aa11.62□□□□□ -0.55
LTBP1-207ENST00000418533 GOLGA3Q08378 1498 aa11.6□□□□□ -0.55
LTBP1-207ENST00000418533 ANP32BQ92688 251 aaKnown RBP11.6□□□□□ -0.55
LTBP1-207ENST00000418533 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
LTBP1-207ENST00000418533 NBR1Q14596 966 aa11.6□□□□□ -0.55
LTBP1-207ENST00000418533 NPM2Q86SE8 214 aaKnown RBP11.59□□□□□ -0.55
LTBP1-207ENST00000418533 MROH2BQ7Z745 1585 aa11.58□□□□□ -0.56
LTBP1-207ENST00000418533 PDS5BQ9NTI5 1447 aa11.58□□□□□ -0.56
LTBP1-207ENST00000418533 MIER1Q8N108 512 aa11.58□□□□□ -0.56
LTBP1-207ENST00000418533 TOP2AP11388 1531 aaKnown RBP11.57□□□□□ -0.56
LTBP1-207ENST00000418533 HDGFP51858 240 aaKnown RBP11.56□□□□□ -0.56
LTBP1-207ENST00000418533 NEFMP07197 916 aa11.55□□□□□ -0.56
LTBP1-207ENST00000418533 CEP164Q9UPV0 1460 aa11.54□□□□□ -0.56
LTBP1-207ENST00000418533 CLIP1P30622 1438 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms